| Tag | Content |
|---|
EnhancerAtlas ID | HS110-00422 |
Organism | Homo sapiens |
Tissue/cell | KATO3 |
Coordinate | chr10:71217750-71220360 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| FOXA1 | MA0148.4 | chr10:71219004-71219020 | CATTAAGTCAACAAAT | + | 6.25 | | ZNF740 | MA0753.2 | chr10:71219675-71219688 | ACCCCCCCCCCAC | + | 6.32 |
|
| | Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
| SE_00177 | chr10:71208884-71237023 | Adipose_Nuclei | | SE_03334 | chr10:71217415-71218032 | Brain_Angular_Gyrus | | SE_03334 | chr10:71218308-71218883 | Brain_Angular_Gyrus | | SE_04154 | chr10:71216588-71221786 | Brain_Anterior_Caudate | | SE_04937 | chr10:71216635-71221777 | Brain_Cingulate_Gyrus | | SE_05904 | chr10:71216127-71221923 | Brain_Hippocampus_Middle | | SE_06878 | chr10:71216373-71221571 | Brain_Hippocampus_Middle_150 | | SE_07975 | chr10:71216588-71219267 | Brain_Inferior_Temporal_Lobe | | SE_07975 | chr10:71219700-71221941 | Brain_Inferior_Temporal_Lobe | | SE_23286 | chr10:71216337-71220954 | Colon_Crypt_1 | | SE_23928 | chr10:71216637-71218016 | Colon_Crypt_2 | | SE_23928 | chr10:71218190-71219803 | Colon_Crypt_2 | | SE_23928 | chr10:71219805-71220891 | Colon_Crypt_2 | | SE_25858 | chr10:71215901-71220911 | Duodenum_Smooth_Muscle | | SE_29794 | chr10:71219457-71221699 | Fetal_Muscle | | SE_31566 | chr10:71215830-71221796 | Gastric | | SE_41723 | chr10:71216331-71218193 | LNCaP | | SE_41723 | chr10:71218269-71221688 | LNCaP | | SE_42468 | chr10:71216218-71221922 | Lung | | SE_47339 | chr10:71216946-71219518 | Panc1 | | SE_48249 | chr10:71215999-71221926 | Psoas_Muscle | | SE_49437 | chr10:71219259-71221866 | Right_Atrium | | SE_50329 | chr10:71216303-71221673 | Sigmoid_Colon | | SE_51407 | chr10:71215733-71221961 | Skeletal_Muscle | | SE_52896 | chr10:71216217-71221726 | Small_Intestine | | SE_54066 | chr10:71216709-71218767 | Spleen | | SE_54066 | chr10:71218864-71221937 | Spleen | | SE_54616 | chr10:71216909-71221726 | Stomach_Smooth_Muscle |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 4 | Chromosome | Start | End |
| chr10 | 71218232 | 71219262 | | chr10 | 71219285 | 71219384 | | chr10 | 71218800 | 71219652 | | chr10 | 71218026 | 71218168 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH10I069456 | chr10 | 71216325 | 71221892 |
|
Enhancer Sequence | AAGAAATCAG AGGCCTGAAG AGAAGTGAGT TGCCTGAAAG CCCACAGCAA GTCAGTGACA 60
GGCCAAGACC AGATCCAGGC TGCCTGACTC CAGTTTCTTC CTCGGGCCCC CATGACCTTT 120
CCAGGCGCCA TGTATGTTTC TCCCTGGTCT CAGGGTGAGG GTAGAAGATA ACCTTTCTGA 180
AAGAGGCCAC GTCCCTGGCC TCCCAGTGAA GCACTAGGTG AAGCCAGGCC AAAAAGAAAG 240
CACTTCTCTG GAGACAGTTT CCAGGAGATT TTTACTTTCG AGAAGAGCTT TATTATTTTT 300
GTGAAAATCA TACATGCGCA TAGCTTAAAA GATTCAAGCC ATTTGGGAAA GTACAACGAA 360
AACAGCAAAA GTCCCCTTTG ATTCTACCAC TGGGATTCAG CCACTGTTAT ATGTTGGTAA 420
ACATCCATCT GGACATCTTG TACATATATG TAGACATTTT ATTTCTTTAA TTATCTTTCT 480
TATTGTGTTT GATTTGTCGA GCAAAGTTCA TTTTCTGGCT CTAGGTAAGC ATTCCAAATA 540
GTGAAACTCA AATAGTGAAG CTGAAAGTGG GGCAGCCTTC ATATTGGAGA AGTGGCCAGC 600
CGTGCCTAAC GGGCTGTCAG AGATGATCTC ATAGCATCAG ACTGGGCTCA GGCCTCGGGC 660
ACAGAGAGGT CCTCCCCTCC CCCAGTCTGG CCACAGAGCC TTTAAAATCC AGAGAATCAG 720
GGCTGCAGCC CTGCCAGGGG TTTGGAGAAC CTTCCAACAC CTTCATTTTA TAGATGAGCA 780
AACTAAGGCC CTGAGAAGTG TCCTTCGCTC TTAACCTAGA CTTTGTACAT GGTCTCGTTC 840
CCCGCTTTAA TAGAGGAATT GCTTTATGTC GTAGGACTGG ACCTTGCTGC CTTTGGGTTG 900
GTTCCTGGAG AAGCAGGAAT AACCACCTGC CCTCCTGCCC GGAGGCCTTT CTTCCCAGGT 960
GACTCACAGT GCCACCCTGG GGTGGGGCTC ACGGTCAACC TGATAAGGGA CTGATAATGA 1020
AATTTCTGTA CCAACTGGCT CCACACAGGG GAAAGATGTT TTCTGGGTAA GTCTGGTCAG 1080
AAGAGGTTGA TGGGGGGAAA ACAAAACAGA CAAAAAAAAA AAAAAAAAAA ACAACAACAA 1140
AACAACCTTT CCCAGAGAGA ACTTTTAGAT GTGAATGGGT TTGAATTGAC TTCTTGTTGG 1200
AAGGCAGGAG CATTCAGTCT TAACCAGCCG TGCTCTCTGG TTGGTTGGTT TGTTCATTAA 1260
GTCAACAAAT AGTTATTTGA TGCCTACTGA ATGCCAGGCA CTGTGATACC GTGATAGGTG 1320
TGGGAAGCAA CTATGAACAA GACAGGTTTA GTCCAGGCCT TGGAAGACAG AGCAGTAAAT 1380
AAATATCACT TGTGATAGGT GCTAAGGAGA AAATTAGGGA GCAAGTGGGG AGGGATGGGC 1440
GTTTCCACTT TCGATGATGT GGTCAGGGAA AGCCTTTATG AGGAGCTGAC ATTTCAGCTG 1500
AAGCTCAAAT AGAGAAGGAG CCAGCCATAA AGACTTGTCC AGAGCATCCC AGGCAGAGAG 1560
AGCCATGAGT TCAAAGTCCC TGAGGCAGGT CGCAAGCATG GCTACAGCAG ATGAGGAAGC 1620
CCGGGAAGGG CTGCGCTGTG GGTGGAGAGG GTGGCAGGGG CCTGGCTGTG TGAAGAGTTT 1680
GGGGTTCGAG TGACTGAGAA GCAGGGTTTC ATTGTCAGGC CCTGTGGTCT TGCCATCCAG 1740
AGACCTAGAT CAGGTGTTGG CTATTCTGTG TGACACTGGG TAAAGGACCA GCTCTCTGAG 1800
CCTCCGAGAT GCCTCCTCTG TGGGTACCCC AGAGGGCAGT GGGGAGGATC CTGTGAGATG 1860
AGAGGTGCCA AAGCACGGGG CCTACTCTAG GGTCCCCCAC CCACGGAGGG AGGGAGACTC 1920
TAGGCACCCC CCCCCCACGA ATGGAGGGAG ACTCTAGGGC TCCCTGCCCA CGGAGGGAGG 1980
GAGAGTCACC TGGGAGCCTT GCATTGCTCA GGGGTAGTTG GGGAGATGAG ATGAGATGAG 2040
ATGAGATGAG ATGAGATGAG ATGAGATGAG ATGAGAACCT CTGGAATCCG TCTTGTCAGA 2100
GGAGGCTCCT TTGCCCCTGG GGGTACTCAG CCTGCCTAGA ACAGATGGCT ATGGAACCAA 2160
CTCCTCCAGC CAGCTGGTCT GACCCCTAGG GTGTGCATGT GGTCTTTTCC AGAGGCTGGG 2220
CCCCTCCCAC CCCTTAGTTT CTGGGCTACC ATGGCACACT GTCAGAAGCA CTAGGCCACA 2280
ACAGGCACGC GGGGCCAGGC AGGCCGTCTG AGAAGTGTCC TGCTAGGCTC TGAGGGGTCC 2340
CAGCCCTCGG TCAGCATGAG TTGTTCAGCT CCAAGCTAGG CCCCTGGGCT GGTGGAGGTG 2400
AGGAAGAGAC ACCGTAGAGA CACTGTAGAC TTACGATGTC ACCTTCCCCA GCTAGAGGGT 2460
TGGCCTGTGA AGGAGCTGGC AGCCATCTCT GCCTCTGGCG ATGTGCCATG TTAGCCCAGG 2520
AACTAAGGGG TGGGAAGGGC CCAGTCCCTG GAAAAGACCA CATGCACGCC CAAGGGGTCA 2580
GACCAGCTGG CTGGAGGAGC TGGTTCCATC 2610
|
