EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS108-28074

Organism

Homo sapiens

Tissue/cell

K562

Coordinate

chr3:49255490-49256800

Target genes

Number: 19
Name	Ensembl ID

ARIH2	ENSG00000177479
RP13	ENSG00000235236
P4HTM	ENSG00000178467
WDR6	ENSG00000178252
NDUFAF3	ENSG00000178057
MIR191	ENSG00000207605
DALRD3	ENSG00000178149
IMPDH2	ENSG00000178035
AC135506.1	ENSG00000241461
QRICH1	ENSG00000198218
QARS	ENSG00000172053
USP19	ENSG00000172046
LAMB2	ENSG00000172037
CCDC71	ENSG00000177352
KLHDC8B	ENSG00000185909
C3orf62	ENSG00000188315
USP4	ENSG00000114316
AMT	ENSG00000145020
NICN1	ENSG00000145029

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EGR2	MA0472.2	chr3:49256669-49256680	ACGCCCACGCT	+	6.02
NFE2L1	MA0089.2	chr3:49256210-49256225	CTTGCTGAGTCATGC	-	7.01
Nfe2l2	MA0150.2	chr3:49256212-49256227	TGCTGAGTCATGCAG	-	7.41

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I049217

chr3

49255088

49257141

Enhancer Sequence

ACACTGGCTT TCTTATTAGC AGCTTACTCT CACACTCTCC GCCCTGCTGT CTTGGCTGCT 60
TGAGCTGGCT GCCCCCATGA GCAGCTGCGC AGCTGGCTCT CCCTTCCCTT CAGGGTCAGC 120
AGCTTAACTC TTTCTCTGGG CACAAGCAAG CTGAGGTGTA TCCTGGTTCC CACCTCTCCG 180
TCTGCAAAGA AGGACAGCTC CGGCTCTCTC TCTCTCTTTC TCTGGGTGCC AGCATGCCCA 240
CCATGTCAAG CCATGTTGAG CTGAGCCAAG CCAAGCCCCC AAGAGACCCC TGTACAGTGT 300
CAGCAGGACA GTTAATACCT TTTTTTTTTT TTTTTTTTTT TTTGAGATAG TCTTGCTCTG 360
TTGCCCAGGC TGGAGTGCAG TGGATGCAAT CTTGGCTCAC TGCAGCCTCT GCCTTCTGGG 420
TTCTAGTGAT TCTCTTGCCT CAGACTCCCA AGTAGCAGGG ATTACAAGCA CATGCCACCA 480
CACCCGGCTA ATTTTTGTAT TTTTAGTAGA GATGGGATTT CACCATGTTG GCCAGGCTGA 540
TTTCAAACTC CTGACCTTAT GATCCGCCCA CCTTGGCCTC TCAAAGTGCT GGGATTATAG 600
ACGTGAGCCA CTGCTCTTGG CTGCAGTTAT ACCTTTTTCA GACAATAGTG GCATAGAGCC 660
AAGTATGAAC TTACACAAAC AGGTTATATA ACAAGTGGAG TTATGTGCTT GCATGCCAAA 720
CTTGCTGAGT CATGCAGGCC TGGATATCTG CCTCGGCCTA TTCCTTGACT AAAGCACATC 780
CGTGTACCTT ACAATGACAA AACCCTGTCT CTACAAAAAA TAAAAAAATT AGCTGGGCGT 840
GGTGATGCAT GCCTACTAGG GAGGCTGAGT TGGGAGGATC ACCTGAGCAG AGGTTGCAGT 900
GAGATGGGAT CATGCCATTG CATTCCAGCC TGGGTGACAG AGCAAGATCC TGTCTCAAAA 960
AATGAATAAA TAAAAAATAA GAGGCTCATG CTTGTAATCC CAGCACTTTG GAAGGCTGAG 1020
GCGGATGCAT CACTTGAGGT CAGGAGTTTG AGACCAGCCT GGCCAACATG GTGAAACCCC 1080
ATTGTTGGGA ACAGGCCCCC AAGTCTGGCC ATAAACGGGC CTCAAAACTG GCCAAAAACA 1140
AAATCTCCAC AGCAGTGTGA CATGTTCATG ATGGCCTTGA CGCCCACGCT GAAGGTGGTG 1200
GGTTTACCGG AATGAGGGCA AGGAACACCT CACCCACCCA GGGCAGAAAA CTGCTTAAAG 1260
GCAATCCTAA ACCACAACCA ATAGCATGAA TGATTTGTGC CTTAAGGACA 1310