EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS108-26183

Organism

Homo sapiens

Tissue/cell

K562

Coordinate

chr21:45195050-45196080

Target genes

Number: 16
Name	Ensembl ID

RPL31P1	ENSG00000214326
H2BFS	ENSG00000234289
HSF2BP	ENSG00000160207
RRP1B	ENSG00000160208
PDXK	ENSG00000160209
AP001052.9	ENSG00000241238
CSTB	ENSG00000160213
TMEM97P1	ENSG00000234030
RRP1	ENSG00000160214
AP001053.11	ENSG00000215458
MYL6P1	ENSG00000226543
AGPAT3	ENSG00000160216
TRAPPC10	ENSG00000160218
H2AFZP1	ENSG00000213440
PWP2	ENSG00000241945
C21orf33	ENSG00000160221

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZIC1	MA0696.1	chr21:45195902-45195916	GGCCCCCCGCTGCT	+	6.16
ZIC3	MA0697.1	chr21:45195902-45195917	GGCCCCCCGCTGCTC	+	6.41
ZIC4	MA0751.1	chr21:45195902-45195917	GGCCCCCCGCTGCTC	+	6.49

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_00247	chr21:45192004-45196986	Adipose_Nuclei
SE_24314	chr21:45195474-45196867	Colon_Crypt_2
SE_25151	chr21:45195098-45196877	Colon_Crypt_3
SE_26733	chr21:45190721-45196937	Esophagus
SE_56219	chr21:45193945-45196986	u87
SE_57364	chr21:45195408-45196839	VACO_503
SE_67817	chr21:45193945-45196986	u87

Enhancer Sequence

CCGAGATTGT GCCACTGCAC TCCACCCTGG GCAAGAGTGA GACTGAGTCT CAAAAACAAA 60
AAAAAAAAAC ACAGGCCTCA GCATCGCCTG GACCTGTTCT TGCTTGGGGC ATCCCGTCGG 120
TCACCAACCA TGACAGCGAG GCGGGCCTGG CCTGTGCTCC ACCGGAGGGG GCTTCTTGCA 180
CAGATGACCT GCTCATTTCA GCCCCTCCAG AATCTTCTGG CAGGCGCAGA GCAACAGGAC 240
GTCCATTTTA CAGACGAGGA AACCGAGACA CAGGGAAGGT TGCCATCTGC AACCCAGCCC 300
GGTTTTTATC TTGTTTTTCT GTGTTTTAAC TTTTTATTTA GACTTACAGT TTGAAACAGT 360
GCTAGAATCG GAAGCATGTA AAGAAACCTG TGGACCTTTT ATGCAGATAC ACTTAAGTTT 420
TTAACCCATG TGCCTTATCA CTGGGGACCT CTTGCACTCT CTCTCATGAT TTTTTTCCCG 480
AACTAGATGA GGATATTGAC AAAGATTCTT GCTTGGCCAA ACTGTAGTCG GGCTCCTGAA 540
GCGCCTAGGC CACCTGCGCA CTTCCTTGTA AAATCCACTT TTAGCAAGAA GCCTGGCTAA 600
GTCAGTTTAG CCAGACCCTT CCCACCCGCT TGCTATCGGA TCACCGTGGA GATCGGAGCC 660
GGCTGCTCAC CTGCGCCATC GCCGGCGACG CCCGATCACC CTGCCTGCCT GAAACCAGAA 720
GCGCCTCATC CCTGGGGTTT CCTCTCAGAG ACTGTCCATG CAGGGACCGC ACCCTGCTCC 780
GGGCTATCAA TTCCCACTCG CCCTTGCTGT ATTCAGCGGA GCCCAATGTC TCCCCAGCGG 840
CGCCCCAGGC GCGGCCCCCC GCTGCTCACT CGCGCGCAGC GCCCGAGCGG AGGGAGGCCT 900
CTCACGGCCA CAGCCCGGGC CAGCCCAGGG GTGCGCAGCG GGGCCAAAGC GGCTTCTTTC 960
GCTCCAGGAG CCGCGGCCGC GCCCTGAGGC TAAGGCAGGA CTCCGGGCCG GCCCCGTCCC 1020
CGCGGCCCAC 1030