EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS108-25312

Organism

Homo sapiens

Tissue/cell

K562

Coordinate

chr20:44598330-44599360

Target genes

Number: 24
Name	Ensembl ID

RPS2P7	ENSG00000235508
HNRNPA1P3	ENSG00000226188
WFDC3	ENSG00000124116
DNTTIP1	ENSG00000101457
UBE2C	ENSG00000175063
TNNC2	ENSG00000101470
SNX21	ENSG00000124104
ACOT8	ENSG00000101473
ZSWIM3	ENSG00000132801
ZSWIM1	ENSG00000168612
SPATA25	ENSG00000149634
CTSA	ENSG00000064601
NEURL2	ENSG00000124257
PLTP	ENSG00000100979
PCIF1	ENSG00000100982
ZNF335	ENSG00000198026
FTLP1	ENSG00000235525
MMP9	ENSG00000100985
SLC12A5	ENSG00000124140
RP11	ENSG00000240742
NCOA5	ENSG00000124160
RPL13P2	ENSG00000213820
CD40	ENSG00000101017
SLC35C2	ENSG00000080189

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MLX	MA0663.1	chr20:44598986-44598996	ATCACGTGAT	+	6.02
MLX	MA0663.1	chr20:44598986-44598996	ATCACGTGAT	-	6.02
MLXIPL	MA0664.1	chr20:44598986-44598996	ATCACGTGAT	+	6.02
MLXIPL	MA0664.1	chr20:44598986-44598996	ATCACGTGAT	-	6.02

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_19682	chr20:44598332-44601669	CD4p_CD25-_Il17p_PMAstim_Th17
SE_22675	chr20:44598343-44601845	CD8_primiary
SE_35167	chr20:44598338-44602558	HeLa
SE_56710	chr20:44596244-44601985	u87

Enhancer Sequence

CTGAGGGGCA TGAAACAGGG AGGGAAAAAG TTTAGCAGCT GGGTATGGGG CAGGGCAGCC 60
TGCCAGCTCC CACTTGCTAG ACAGAGCTCT CAGGCCCAAG GACATGGTCA GTGGAGCCAC 120
TCATGCCCTC AGCCCCACGG AGGACCAGTG AGAGAGGCCC TCCAGTCACA GAGTCCCCCA 180
GGAAAAAGTC ACAGGGTCCC TGGATCTCAT CAGGGAATAC ACAAAAATAA GAGAAGGGAC 240
TCCTAAGCCA CAGCCAGGGG GAGCTATTTT CTTTGGGCTT TTGCATAAAT CGTTCCCTCT 300
GCCTGAAACT CTTCCCAGCA TCACCCTATG GCTAAATCTT ACCCAGCCTT CTCACCACCA 360
TTTAGCTGGT ACCTCTTCTA GGAAGTCAAT GCTGGCTTTG AGGCCAAGTC AGGACTTCTT 420
CATCCTCAGT GCTGCAGCTG CCTGTGTCCC CAGCACCACA CCACTGTGGG GTTCATTGTG 480
CCTTTTAACA GCCTCCATGC CAGACTGTGC CCTCCACAAG GGCCTGGACC AAACTTGTCT 540
TTTCCTCTGC TGTATTTCCA GGGCCCAGCA CACGCTGAGC ACATGGTAGG CCCCCATCTC 600
TGCTGAACTA ATGAAACCCC AGGACCCCAA AGTGATGACC ACTGCTGTGT ACTTCTATCA 660
CGTGATATAC TGAATATGAC CATTATCTTG CATATAAGAA TGGCTAATAC TTACTGAGTG 720
CTTACAATGT GCTGAGCACT GTTTTAATTA TTAGCTTTGC ATATGTTAAT TCATTTCATC 780
CTCACAAAAA CTCTATGAGG CAGGTATATT TACCATTCCC ACTTTACAGA CGAGGAAACA 840
GAGCTAGATG TTGGGTAGCT TGCTCAAGAT CACACGGCTA GGAAGTGGCA CAGCCAGGAG 900
GAGATGGTTT ACAAAATGTT TGCAAGAGGA TGTCTGGTGG GAGCTCACAA TCAAGCACCC 960
TTGAAAGCAA GTATTTCTGC TTTACTTTAG CCGGGATACT GAGGCTCAAA GAGGTCTCCC 1020
AGTAAACTGG 1030