EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS108-20689

Organism

Homo sapiens

Tissue/cell

K562

Coordinate

chr19:46512750-46513560

Target genes

Number: 18
Name	Ensembl ID

ERCC2	ENSG00000104884
ERCC1	ENSG00000012061
RTN2	ENSG00000125744
VASP	ENSG00000125753
OPA3	ENSG00000125741
EML2	ENSG00000125746
AC006132.1	ENSG00000241226
MIR642A	ENSG00000207773
SNRPD2	ENSG00000125743
QPCTL	ENSG00000011478
FBXO46	ENSG00000177051
DMWD	ENSG00000185800
IRF2BP1	ENSG00000170604
NANOS2	ENSG00000188425
NOVA2	ENSG00000104967
CCDC61	ENSG00000104983
PGLYRP1	ENSG00000008438
TGIF1P1	ENSG00000259339

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr19:46513171-46513190	TGGCCACAAGGGGGCGCCC	+	8.14
GATA2	MA0036.3	chr19:46513245-46513256	TTCTTATCTTC	+	6.02

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH19I046009	chr19	46512801	46513030
GH19I046010	chr19	46513081	46513270

Enhancer Sequence

CACCGTTTGA CAGAGGCCCA GAGAAGTTAG GGAACTTGGC GCAGGTCACA CAGTGGGTAA 60
TATGGCTAGG CTGGACCTTA GATCCAGGCA GCCAGCGCCG AGCCTCTGTT GTTTCCCCAG 120
CTGTTTGCAC TGTTGGTGGC TGCAAGCCCA GGACAGAGCG CTAAGTGCTG ACCCGGAGGA 180
CCAGTCCTTA TGGGAGCTCA TGGGGCTGGG GAACCCCGCC GGTCTTTGGA GGAGCTCGCC 240
TGTGTACGGC TGGGCCGAGG AAGGCCGCAG TGGGGAGGCC AAAATTTATC CTCAGGATCT 300
GCTCTCAGGC TGTGTGTGTG TGTATGTGTG TGTGTGTGTG TGTGTGCGCG CGCGTTTGCT 360
CTGTCTCAGG CTGTGTGTGT GTGTTTCTAG GTTTGTGTTT CTGGGTGTGT GTTTCCCAAG 420
ATGGCCACAA GGGGGCGCCC TCCACCCTTT GGAACCAACC ACAGGAGCCT TGAGATCCCA 480
CCGCTGCTCA GTGGCTTCTT ATCTTCCTCT TCCCAGCCAG GAATTAGGGA GTTTGGGAAG 540
GTTCTGAGAT TTATTCATTC ATTGAGCCAA CATTTATGGA GTTCATACTG TGCCAGGCAC 600
ACTGCCTGAC GCTAGTTAAT GTTTATTATG CTAGACATGG TCTAAGCACT GTGGATAGAT 660
TCTTACAGCC TAACAGGCGG GCATTCTTAT TATCGTCCCT CTTCACAGAT GAGAAAAGAT 720
GGCCTGAGGC TCAGAGATGT GAAGTGAAAC TGCCCAGGGC CACCCAGCTT GTTAACAAGT 780
GGAATAGAGT TGAATGCAGG GCGCCCGGCC 810