EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS108-19599

Organism

Homo sapiens

Tissue/cell

K562

Coordinate

chr19:11472160-11473180

Target genes

Number: 22
Name	Ensembl ID

LDLR	ENSG00000130164
RAB3D	ENSG00000105514
TMEM205	ENSG00000105518
CCDC159	ENSG00000183401
AC024575.1	ENSG00000105520
SWSAP1	ENSG00000173928
EPOR	ENSG00000187266
Y	ENSG00000202357
RGL3	ENSG00000205517
PRKCSH	ENSG00000130175
CCDC151	ENSG00000198003
snoU13	ENSG00000238349
AC008481.1	ENSG00000244080
CTC	ENSG00000213304
ECSIT	ENSG00000130159
CNN1	ENSG00000130176
ELOF1	ENSG00000130165
ACP5	ENSG00000102575
ZNF627	ENSG00000198551
ZNF833P	ENSG00000197332
HNRNPA1P10	ENSG00000214223
ZNF823	ENSG00000197933

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF13	MA0657.1	chr19:11472629-11472647	TGGCCACGCCCCTTGCTC	+	6.22
KLF14	MA0740.1	chr19:11472630-11472644	GGCCACGCCCCTTG	+	6.08
KLF16	MA0741.1	chr19:11472336-11472347	GCCACGCCCCC	+	6.62
Klf12	MA0742.1	chr19:11472843-11472858	GGCCACGCCCTAATC	+	7.01
SP1	MA0079.4	chr19:11472628-11472643	CTGGCCACGCCCCTT	+	6.54
SP1	MA0079.4	chr19:11472333-11472348	CTAGCCACGCCCCCA	+	7.29
SP3	MA0746.2	chr19:11472630-11472643	GGCCACGCCCCTT	+	6.02
SP3	MA0746.2	chr19:11472335-11472348	AGCCACGCCCCCA	+	6.34
SP4	MA0685.1	chr19:11472628-11472645	CTGGCCACGCCCCTTGC	+	6.59
SP4	MA0685.1	chr19:11472333-11472350	CTAGCCACGCCCCCAGT	+	7.08
SP8	MA0747.1	chr19:11472336-11472348	GCCACGCCCCCA	+	6.11

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I011360

chr19

11471281

11473515

Enhancer Sequence

AGCGGTGAGC TTCGGGAGCT TCGGGGTCGG AAATGGGTGT GCAGGCTGGA CAGCGACCAG 60
CAGCTAGGAA GCCGCCAGGG TTGGAGCCTC TGCTCTTCCA CGCCCCGGGT GCTGTTGGAA 120
GCTCTCGCTC CACGCCCCGA CCTGTTGGAA GCTCTCCCTC CTCCTCCCAG ATCCTAGCCA 180
CGCCCCCAGT CAGAGGCTAT CGCTGTCCAT TGACTCCGCC CCTTGCCCTC TGGCCACGCC 240
TCCTGAGCCA GTAATGCGAG GGAAACTGTT GGCTCTACCC TATGGCATCA GGACAGTCCC 300
TGATGTGCAA GACTCGGAAC CCCTATAGCC TAGCCAGGCC CCCAGGATGC TACAGGCGCT 360
AGATATTAGC TGGCAGACTG GGCAGATGGG ACGGCCCCCT GGAGTCCTTG CCCCTCTTCT 420
GGAGCCCTTG CCCCTCTCCT GGGGGCCTTG TTCCCTCCTG TTGTAGCCCT GGCCACGCCC 480
CTTGCTCTTA ACTGCTCTGG GATTTCTAAC TCTGTCCCCT GCTTTTTCCT GGTCACATCC 540
CCTGTTGCTT CAACTCTTTT TTCTGGCATC CGGGTTTATG CTCCCACCCT GTCAGTGGTC 600
CCCTAGGGGT CAGGGGCTCC ACCTCCTACA GCTCCTACAG CTCCTACAGC TCCCTTCGCC 660
CTGACTCCAC CCTCTGGTTC TGTGGCCACG CCCTAATCCA GTAAGTGTCT GTCCCCATCT 720
GCGACTCCGG ACCAGGGACA CCTGGGCCCC AGACCTTGTC CTCTGCTCTT GGGAGCTCTG 780
GCCACACCTA GCCCTGCAGG TGGTGCCCAC GAGACTCCAA GACCTCAATC CCTGACCCCC 840
CCCCCTTTGC CTTTTTGGTC ACGCTCCCTG GAAAAGCCCA CTGGGAGCCC ATGACTCCAA 900
CCCTGGAGCC CCTGGCCACT CCCTCCAGCC CCAACGCTCT GGCCATGCGC TCTAGCCCAG 960
AAAGGAGCGT CCACTTGGGT TCGGCGACTT GCCTCCGCTA TCCCCCTGAC CAGTCCGGCT 1020