EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS108-02971

Organism

Homo sapiens

Tissue/cell

K562

Coordinate

chr1:154916140-154916550

Target genes

Number: 34
Name	Ensembl ID

PMVK	ENSG00000163344
PBXIP1	ENSG00000163346
PYGO2	ENSG00000163348
SHC1	ENSG00000160691
CKS1B	ENSG00000173207
FLAD1	ENSG00000160688
LENEP	ENSG00000163352
ZBTB7B	ENSG00000160685
DCST2	ENSG00000163354
RP11	ENSG00000232093
ADAM15	ENSG00000143537
EFNA4	ENSG00000243364
EFNA3	ENSG00000143590
Y	ENSG00000202027
EFNA1	ENSG00000169242
SLC50A1	ENSG00000169241
DPM3	ENSG00000179085
HMGN2P18	ENSG00000223452
TRIM46	ENSG00000163462
KRTCAP2	ENSG00000163463
MUC1	ENSG00000185499
MTX1	ENSG00000173171
THBS3	ENSG00000169231
GBAP1	ENSG00000160766
MTX1P1	ENSG00000236675
AL713999.1	ENSG00000216109
GBA	ENSG00000177628
FAM189B	ENSG00000160767
SCAMP3	ENSG00000116521
HCN3	ENSG00000143630
CLK2	ENSG00000176444
PKLR	ENSG00000143627
FDPS	ENSG00000160752
RUSC1	ENSG00000160753

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF

MA0139.1

chr1:154916423-154916442

GGGTGCCACCTAGTGGTTC

6.5

dbSUPER

Number of super-enhancer constituents: 15
ID	Coordinate	Tissue/cell

SE_10773	chr1:154914194-154917610	CD19_Primary
SE_11976	chr1:154914181-154916693	CD3
SE_12908	chr1:154916071-154916702	CD34_Primary_RO01480
SE_16929	chr1:154913661-154916990	CD4p_CD225int_CD127p_Tmem
SE_20883	chr1:154915952-154917646	CD8_Memory_7pool
SE_22356	chr1:154914220-154917138	CD8_primiary
SE_27195	chr1:154915760-154917372	Esophagus
SE_28280	chr1:154915844-154918584	Fetal_Intestine
SE_29277	chr1:154915792-154918273	Fetal_Intestine_Large
SE_43530	chr1:154907507-154922645	MM1S
SE_52835	chr1:154915811-154918586	Small_Intestine
SE_53787	chr1:154912441-154917339	Spleen
SE_59728	chr1:154908004-154930021	Ly4
SE_62808	chr1:154907953-154929742	Tonsil
SE_67174	chr1:154907507-154922645	MM1S

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I154940

chr1

154912477

154918501

Enhancer Sequence

TTCTAGAACC TGTAGTCCCC CGCCTCCTGC CTGAGCAGTC ACACCACATT ATTCTGTCTC 60
CTGTACTTCC TGGGCATTTC CAGGGTCATC AAAAAGCCCA GTGTATTGCC GAAGGGACTA 120
AGGTTAGATC TCAGGAAGGA CTTCCTAGAG AATAGCCAAG GGGAGTCTGG TCATCCTGGG 180
AGAGCTGGCC AGTGGAGCAG GCGCTGGGGT CAGTGGGGTA GGGTCTGAGA TTTTGGGGAC 240
AGTGAGTAGT GGGAGAGGCG AGGTCTGGAG CAAAATGGAG CCAGGGTGCC ACCTAGTGGT 300
TCCCTCACCT CCCCAGCCCC AGAAGCTCTT CCTTCTGGGC CTGGGTTCTT TTCCCTCCTC 360
CACACCCTTC CCTAAAGAAG GCAATAACTT TTGAGTGCCC AAAACAGGAG 410