EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-83994

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr9:139230560-139231370

Target genes

Number: 19
Name	Ensembl ID

UBAC1	ENSG00000130560
NACC2	ENSG00000148411
C9orf69	ENSG00000238227
QSOX2	ENSG00000165661
GPSM1	ENSG00000160360
DNLZ	ENSG00000213221
CARD9	ENSG00000187796
SNAPC4	ENSG00000165684
SDCCAG3	ENSG00000165689
PMPCA	ENSG00000165688
INPP5E	ENSG00000148384
SEC16A	ENSG00000148396
RP11	ENSG00000227512
NOTCH1	ENSG00000148400
AGPAT2	ENSG00000169692
TMEM141	ENSG00000244187
C9orf86	ENSG00000196642
PHPT1	ENSG00000054148
EDF1	ENSG00000107223

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr9:139230722-139230742	CCCCAAAACAGGCCCCCCCA	+	6.42
ZNF263	MA0528.1	chr9:139231164-139231185	AGAGGAGGGAGGGATGGTGAG	+	6.11

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH09I136334

chr9

139228511

139232849

Enhancer Sequence

GGGGGCTTGG TCCGGGGCTG GGTGTCTCCC ACCCCTGCAC CGGCCTGCGT CCAGATCCGG 60
GATAGGGGCG GGCGGGTGAC TCACCACTCA TCCAGCTCCT CATGGGAGGG ATGACAGGGA 120
GGTCGGTCCC CTAGATCCCG AGTGACTCAG GAGAGTGTGG GCCCCCAAAA CAGGCCCCCC 180
CAGCCCATGC TGACACTGCA GCCCAGGCCC CCACCTTCCA CCCTCAGTTC TGCCGCCCCT 240
CTCGGTGACC TCCCCCCGAA TCCCTCCACA CCCCCAGTCA CTCACTCCCT GGGGGGCCCA 300
GCGGGAGGCC GGGGGTGGCT CTGGGCTGCG GCAGTGGGAG GCCGATTTCA ATGGCGGTGG 360
TGACAGCAGG AAGAGTGGCT CCGTCTCCGC TTGTGCTGGA CCCGAGACAG GCTTTGCTGA 420
CCTCCCTCCA TGGCCCTGTG AGGCGAGAAA ACCAAGGCTG GGGGGACGTG ACTTACCCCC 480
CGTCACACAG CTGGAGGTGA CCAAGGGGGC TTGAGGCCGC AGCATCTGGT CCCAGCTGGA 540
GCTTTCAGCC TCGGTCATCA GAGGACAGAG CTGAGGACCT GGCACCCTGG CCACGCCAAT 600
CCGCAGAGGA GGGAGGGATG GTGAGGGAGG GCGGAGGCTG GCTTCCCGGG TGTGCCGTCC 660
TCAGGCTTCC GCCCCTGCCT TAGTGTCTGT GACTCAGTGG GAGCCCCCAA GGCCCTCGCT 720
GTCGAGGGCT GGGACAGTGA GGACACCGGT GTGCCGGCTC TGCACATCGT GTGGGGGGCC 780
GTGGAGGCAT GCCCCCAACC CTCCGTACTG 810