Tag | Content |
---|
EnhancerAtlas ID | HS105-77090 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr8:27219010-27220080 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RORA(var.2) | MA0072.1 | chr8:27219169-27219183 | TAAAATTAGGTCAT | + | 6.06 |
|
| Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
SE_08208 | chr8:27218876-27220303 | Brain_Inferior_Temporal_Lobe | SE_09156 | chr8:27216720-27239058 | CD14 | SE_10267 | chr8:27216807-27227080 | CD19_Primary | SE_10868 | chr8:27181046-27285079 | CD20 | SE_12034 | chr8:27217227-27222204 | CD3 | SE_13758 | chr8:27218532-27227087 | CD34_Primary_RO01536 | SE_14795 | chr8:27217610-27222557 | CD4_Memory_Primary_7pool | SE_16778 | chr8:27218837-27221619 | CD4_Naive_Primary_8pool | SE_17600 | chr8:27217455-27229236 | CD4p_CD25-_CD45RAp_Naive | SE_18325 | chr8:27216741-27229078 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19392 | chr8:27216824-27222187 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20066 | chr8:27216778-27230915 | CD56 | SE_21397 | chr8:27217312-27222271 | CD8_Memory_7pool | SE_22414 | chr8:27216753-27229136 | CD8_primiary | SE_27921 | chr8:27218674-27221105 | Fetal_Intestine | SE_28623 | chr8:27217934-27222042 | Fetal_Intestine_Large | SE_31168 | chr8:27218925-27226604 | Fetal_Thymus | SE_32488 | chr8:27216612-27229104 | GM12878 | SE_40108 | chr8:27217492-27224812 | K562 | SE_41696 | chr8:27218982-27220305 | LNCaP | SE_43522 | chr8:27216759-27225361 | MM1S | SE_50221 | chr8:27218813-27227034 | Sigmoid_Colon | SE_52630 | chr8:27218810-27227024 | Small_Intestine | SE_53591 | chr8:27218861-27222787 | Spleen | SE_55148 | chr8:27219032-27220487 | Thymus | SE_59882 | chr8:27206325-27247753 | Ly4 | SE_60867 | chr8:27217627-27263346 | DHL6 | SE_62276 | chr8:27181124-27271753 | Tonsil | SE_67171 | chr8:27216759-27225361 | MM1S |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr8 | 27219305 | 27219672 | chr8 | 27219743 | 27220043 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH08I027359 | chr8 | 27216947 | 27230373 |
|
Enhancer Sequence | GATTACAGGC ATGAGCCACC GCAGCCGGCC TGGATTTGGC TCTTTAAAGG AAAGAGCGAG 60 CCCTGGACTG GGCAGGGTGG GAAAATGGCC CCAGCTCTCC CTCTGACTTC AGGGAGGGAC 120 CTTGGATAGG GGGCTTATGG GCTCCAGGCA CCTTCTCTGT AAAATTAGGT CATACTAAGG 180 GAGCTGGAGG GCCCTTCTCT TTCTGGTATC CCAGGTGGTC TCCCCAGGGG TGGTGGTTGT 240 GGCTGAGGCC CACTGCCTGC TTTTCTGGTG CTCTCAATGA AGTACAGTCC TGGGGTCCTC 300 TGTATGTGGA TGGACTAGGC TGTGAAGTCT ATCCGCCCCC CTGCTCCGCT CCACACCCAC 360 ACACTGCTCT TCACTGATAA CCCCGATGAT GCAGACAGCC TCCCTCAGGA ATTTTTCTCA 420 TCCTCCTAGT CATCATTTCA GTCAGCCCTG CCCCGTGTGC CAGACAAGCA CACTCTATGT 480 GTTCAAAGGT GATGCACCGA TCGTGCCCTG TCTGATGTTT ACTAACCAAC CTGACTGGGT 540 CTGTGGGTGA CAAGGGCAGG CCCTGTTTCC CTTGGATCTT CCTTTTATGG ACACAAATCG 600 CTGACCTGTC TGGGCAGGCC TGCTCTAATC CAGGTCTGGC CCTGAGCCTC CTGTCATTTT 660 GCTGACCCAG TTCATCATCC TGGAGGCAGG GCTTGAGTTG AAAAGTTAGA GCCTCAGGGC 720 AGCACCAGGA GCCTGCACTT TCCGGGGCCT CCCCTTCTCT CTCCCCTAGG CTGACCTGTC 780 CTCCCCTCTC CACTTCCTGG GCGTGACTCA CAGGCAGGCC CTATCGGCAT GGCAGGTATG 840 TGTCATTTCC TTATGCTGGT GAGACCCAGA GTTTCAGTGT TAGCACCCCC ACACTGTGGC 900 TCTTCTAGCC CAATGGAGAA GGGCTAAGGG TTTCTAAAGT CGTTGACCTA GGGATTTACT 960 GTTGGGATGA ATTTCTCACC TAGGGGAGGT GTTCTGTTTT TGCTGAGAGA TGACTGTGGG 1020 GAGCAGGGTT CTCTGCTCCT CTGACACTAC TCATCCTCCT TCCCAACACC 1070
|