EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-68327

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr6:26458370-26458830

Target genes

Number: 23
Name	Ensembl ID

HIST1H2BD	ENSG00000158373
HIST1H1PS1	ENSG00000216331
HIST1H3D	ENSG00000197409
HIST1H4E	ENSG00000198518
HIST1H2BG	ENSG00000187990
HIST1H2AE	ENSG00000168274
HIST1H4F	ENSG00000198327
HIST1H3F	ENSG00000256316
HIST1H2BH	ENSG00000197459
HIST1H3G	ENSG00000256018
HIST1H2BI	ENSG00000168242
HIST1H4H	ENSG00000158406
BTN3A2	ENSG00000186470
BTN2A2	ENSG00000124508
BTN3A1	ENSG00000026950
BTN2A3P	ENSG00000124549
BTN3A3	ENSG00000111801
BTN2A1	ENSG00000112763
BTN1A1	ENSG00000124557
HCG11	ENSG00000228223
HMGN4	ENSG00000182952
ABT1	ENSG00000146109
RP11	ENSG00000233631

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4	MA0039.3	chr6:26458554-26458565	GGAGGGTGTGG	-	6.32
ZNF263	MA0528.1	chr6:26458535-26458556	GGAGGAGGAAGTGAAGGGAGG	+	8.39

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_09616	chr6:26456467-26462020	CD14
SE_11578	chr6:26456884-26461980	CD20
SE_17653	chr6:26453941-26460247	CD4p_CD25-_CD45RAp_Naive
SE_18065	chr6:26456669-26460529	CD4p_CD25-_CD45ROp_Memory

Enhancer Sequence

GTAGGAAACG GAGGGGAGGC GCTACAGCTC CGGGGTGGGC ACAGTAGGTG GGGGAAGCGG 60
GGTCTGCTGT GGACACGAGA CGGGGTCCTG GGACAGGGAA AGCCCACCGG TGGGGAGGCG 120
CGGCCTCGCC TGTCTTTGCC TCAGGCTGCC CGGCCTGGGT CGCGGGGAGG AGGAAGTGAA 180
GGGAGGAGGG TGTGGTAGAA TCCAGCGACA ACTGAAGAAA CTGCATTCTG GCCAGAGAAG 240
TGAGCCGAGG AGGGCGGAAA AAGGCCCCCT TGATCTTGGC ATTGATGGCT TACTTCATGG 300
AATGTTTAAG GAATCCCTCT CTCGGGACAT ACCTGAGCCT TCGGATGCAG GGGACTCCCT 360
GAAGTTGGGG CACTGATGAG ACCTACTTGA GTGACGGGAG AGGTTGGGCC CGACCAGCAC 420
TGAGGTGCCA AGACTCCTAG GCTGATTCTC CTCTGTAACC 460