Tag | Content |
---|
EnhancerAtlas ID | HS105-67504 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr6:2739380-2739980 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
GATA2 | MA0036.3 | chr6:2739381-2739392 | AGAGATAAGAA | - | 6.32 | Gata1 | MA0035.3 | chr6:2739381-2739392 | AGAGATAAGAA | - | 6.32 | IRF1 | MA0050.2 | chr6:2739622-2739643 | CCGGACTTTCAGTTTCTCTTC | + | 6.92 |
|
| Number of super-enhancer constituents: 2 | ID | Coordinate | Tissue/cell |
SE_48310 | chr6:2739094-2739686 | Psoas_Muscle | SE_48310 | chr6:2739905-2741230 | Psoas_Muscle |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 2 | ID | Chromosome | Start | End |
GH06I002738 | chr6 | 2739095 | 2739686 | GH06I002740 | chr6 | 2739906 | 2741230 |
|
Enhancer Sequence | TAGAGATAAG AATTCTACCA ACTTCGGCCA GGCACAGTGG CTCACACCTG GAATCCCAAC 60 ACTTTGGGAG GCCAAGGCAG GCAGATCACT ACTGGAGAGC CTGACCAGAA CCAACACAGT 120 GTCTTTTGTG CAGTGGTGGC TCAGTAATGA TTTGCTGAGT AAATTAATAC AGAATCTAGG 180 CATAAATATT TAAAGGAAAG CTGAGACACT AAGGAATCTT GGGTGAGTCC ATCTGACTTT 240 TCCCGGACTT TCAGTTTCTC TTCAGAGAAG GGTTTGAATG AGCTGACCCC CGAAGTTCCT 300 ACGCATTAAG GTCCCTAATC TTTGAGTTAC AACCTGTGGG TCAGAGCACA GCCTTCAGTG 360 TCCCATTCAC TATGGAAACG CCATGACAAC CTGTGTGCAT CTGAAACCCC AAGTGGAGGC 420 AGCCATGAGT CATGGATTAT GTTTATACTG GTATCCAATT GAGCACATAG CATACTATCA 480 CCCTCAATGG ACTGGCAAAT CAGATACTTT TCCCCATTAA AAATGGCAAA TGAGGTTTTA 540 AAAAATCATT ACAATTAATA CAAAATGCCA GGAGGCACTG TACAGGTTGT ATCTCCATAT 600
|