EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-67198

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr5:176797670-176797900

Target genes

Number: 21
Name	Ensembl ID

UIMC1	ENSG00000087206
ZNF346	ENSG00000113761
NSD1	ENSG00000165671
CTD	ENSG00000240729
RAB24	ENSG00000169228
PRELID1	ENSG00000169230
MXD3	ENSG00000213347
LMAN2	ENSG00000169223
RGS14	ENSG00000169220
SLC34A1	ENSG00000131183
GRK6	ENSG00000198055
F12	ENSG00000131187
PRR7	ENSG00000131188
DBN1	ENSG00000113758
RP11	ENSG00000248996
PDLIM7	ENSG00000196923
DOK3	ENSG00000146094
DDX41	ENSG00000183258
FAM193B	ENSG00000146067
TMED9	ENSG00000184840
B4GALT7	ENSG00000027847

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr5:176797744-176797754	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr5:176797762-176797772	GCCCCGCCCC	+	6.02
SP1	MA0079.4	chr5:176797741-176797756	CAGGCCCCGCCCCTC	+	6.22
SP1	MA0079.4	chr5:176797777-176797792	CAAACCCCGCCCCCT	+	6.49
SP2	MA0516.2	chr5:176797776-176797793	ACAAACCCCGCCCCCTA	+	6.58
SP4	MA0685.1	chr5:176797777-176797794	CAAACCCCGCCCCCTAC	+	6.5

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_19396

chr5:176796734-176801316

CD4p_CD25-_Il17p_PMAstim_Th17

Enhancer Sequence

TGTCCTGCCC CCAAGTCTGG GTCCCAGGTC CTGACGCTCC CTTCAGGCCC TGTTCTAGCT 60
ACCTGGCTCC CCAGGCCCCG CCCCTCGTGC TAGCCCCGCC CCTGGGACAA ACCCCGCCCC 120
CTACAAGCCA GTCCCACCTT CTGCAGTTCA AGCTCCACCC CCTCGCGTTT GTCCTGGGAA 180
GGGTTTGGCG GGGGGCCGGC CCTCCGGCCC TCTGCTGCCC GAGGGTTCCT 230