EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-65956

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr5:140241160-140241990

Target genes

Number: 20
Name	Ensembl ID

EIF4EBP3	ENSG00000243056
SRA1	ENSG00000213523
SLC35A4	ENSG00000176087
HAUS1P1	ENSG00000251453
APBB3	ENSG00000113108
TMCO6	ENSG00000113119
IK	ENSG00000113141
NDUFA2	ENSG00000131495
WDR55	ENSG00000120314
HARS2	ENSG00000112855
PCDHA3	ENSG00000255408
PCDHA4	ENSG00000204967
PCDHA7	ENSG00000204963
PCDHA8	ENSG00000204962
PCDHA9	ENSG00000204961
PCDHA10	ENSG00000250120
PCDHA11	ENSG00000249158
PCDHA12	ENSG00000251664
PCDHA13	ENSG00000239389
PCDHAC1	ENSG00000248383

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NKX2-3	MA0672.1	chr5:140241369-140241379	ACCACTTGAA	+	6.02
PRDM1	MA0508.2	chr5:140241172-140241182	GTGAAAGTGA	-	6.02

Enhancer Sequence

TTCCATGTGG AGGTGAAAGT GAAGAACAAT AAAGACAACC TGCCAGTGTT CTCAGCAACA 60
CAAAAGAATC TGTTTCTGAA ACGAGAGCTC TTGATTATCG TGTTTCACTA GAGGGTGTCT 120
GTGATGCCGA CGTCGGGGCC AATGCTCTGA TGACTTACAT ACTGTGCCGC AATGATTATT 180
TTTCCCTGGA AATACCAAGA GCAGGTAAAA CCACTTGAAG GTGTATTTTA AAAATTCTTT 240
CAGATAGGTA AGTCACTTCA GAGCTACTCT TGGTGCTCAA AGCAACTGAT GGGGGCGAAG 300
CTGAGCTGAC AGGCACCAAA GCATTATATA TCACAGCGCT GGATGTAAAT GATGATGCCC 360
AGTGTTTGAC AAAGGAGTCT ATCATGTGAA ATTACTGGAA AATGCAAGAG AAGGTACACT 420
GGTTATTAGA CTTAACCCCT TGGATTTTGA CGAGGGTTCA AACCGTCACA TTGTTTCTTT 480
GCAACTGATG TCTCCCCTAA CATAGAAGCC CTTTTTCGCA TAGATTCAGA CAGTGGATAA 540
ATAAATGTAA AGATAGGTTT TGAGGAAACT AAATAATGAA AGATTCAAAT ACAGGCAGTT 600
GACACAGGCA ATTCCCCAAT GTTTGATCAC TGCACAGACT TGATAGAAGT CTTGGACATC 660
AATGATAGTG TTCCAGAGTT AGCAGTAAGT CACTATCATT CCCTGTACAG GAGGACGCTC 720
CACTGGGTAC CGTCATAGCC CTAATCAGTG TAATTGACCC TAACTTCAGT GCCAAGGGAC 780
AGACGACCCG CACCCTGACT CCTCACGTCT CTTCAAGCTG GTGTCTACCT 830