Tag | Content |
---|
EnhancerAtlas ID | HS105-65567 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr5:131825180-131826230 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
PPARG | MA0066.1 | chr5:131825767-131825787 | GTAGGTCACGATTCCCTCCA | + | 6.14 |
|
| Number of super-enhancer constituents: 48 | ID | Coordinate | Tissue/cell |
SE_00037 | chr5:131820679-131837440 | Adipose_Nuclei | SE_04124 | chr5:131822317-131828498 | Brain_Anterior_Caudate | SE_06435 | chr5:131820979-131828153 | Brain_Hippocampus_Middle | SE_09163 | chr5:131820716-131828938 | CD14 | SE_10340 | chr5:131821077-131828016 | CD19_Primary | SE_10915 | chr5:131818633-131838738 | CD20 | SE_11856 | chr5:131820867-131826566 | CD3 | SE_13479 | chr5:131820821-131827719 | CD34_Primary_RO01536 | SE_14495 | chr5:131821083-131828600 | CD4_Memory_Primary_7pool | SE_15423 | chr5:131822682-131828323 | CD4_Memory_Primary_8pool | SE_16304 | chr5:131821927-131828524 | CD4_Naive_Primary_8pool | SE_16894 | chr5:131821079-131828658 | CD4p_CD225int_CD127p_Tmem | SE_17370 | chr5:131818848-131837330 | CD4p_CD25-_CD45RAp_Naive | SE_17764 | chr5:131818558-131837415 | CD4p_CD25-_CD45ROp_Memory | SE_18258 | chr5:131818792-131837424 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19103 | chr5:131820789-131828689 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_19972 | chr5:131818509-131828458 | CD56 | SE_20775 | chr5:131821333-131828440 | CD8_Memory_7pool | SE_21523 | chr5:131820966-131828488 | CD8_Naive_7pool | SE_21960 | chr5:131821153-131828292 | CD8_Naive_8pool | SE_22284 | chr5:131818534-131837164 | CD8_primiary | SE_23079 | chr5:131824446-131828082 | Colon_Crypt_1 | SE_23750 | chr5:131825087-131825448 | Colon_Crypt_2 | SE_23750 | chr5:131825505-131826587 | Colon_Crypt_2 | SE_25340 | chr5:131820753-131827693 | DND41 | SE_25784 | chr5:131820891-131828422 | Duodenum_Smooth_Muscle | SE_26597 | chr5:131825022-131828439 | Esophagus | SE_27629 | chr5:131820802-131827931 | Fetal_Intestine | SE_28559 | chr5:131821975-131827763 | Fetal_Intestine_Large | SE_30917 | chr5:131822533-131827364 | Fetal_Thymus | SE_31393 | chr5:131824433-131828160 | Gastric | SE_39368 | chr5:131823719-131825657 | Jurkat | SE_40726 | chr5:131824442-131828425 | Left_Ventricle | SE_42103 | chr5:131824376-131828447 | Lung | SE_44054 | chr5:131823784-131827597 | MM1S | SE_48659 | chr5:131825037-131828266 | Right_Atrium | SE_50023 | chr5:131823832-131825960 | RPMI-8402 | SE_50051 | chr5:131820849-131828484 | Sigmoid_Colon | SE_52336 | chr5:131820826-131828467 | Small_Intestine | SE_53285 | chr5:131820823-131828357 | Spleen | SE_54554 | chr5:131825027-131828037 | Stomach_Smooth_Muscle | SE_57943 | chr5:131825657-131826064 | VACO_9m | SE_57943 | chr5:131826067-131826537 | VACO_9m | SE_61818 | chr5:131790756-131837647 | Toledo | SE_62219 | chr5:131721125-131837948 | Tonsil | SE_65342 | chr5:131824512-131828028 | Pancreatic_islets | SE_66244 | chr5:131823719-131825657 | Jurkat | SE_67186 | chr5:131823784-131827597 | MM1S |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr5 | 131825200 | 131825842 | chr5 | 131825941 | 131826000 |
|
Enhancer Sequence | AAGAGAACAC AGAGGCTCCA GTCTGGAATC TGTTGAACAG TACCTGGGCA GTGACCTGCC 60 CCACCCGAGG TCACTTAGTT ACCCTCCCCT CACCTCAGCC AGCTGCTAGG TACTACACTC 120 AGTGCGGAGG GGAGCTGCGC TGGAATAAAA CTGCTCTCCA AATTTTTTCA GCATCTTAGG 180 CAAAAATGCT TTTGCCCCTT CCTTCAGCCC CTCCCAGCCA GTCTCTGGAG GAGACAGGCA 240 TGCAAGTGAT GGCTTCAGGA TTCATATGCA GGAAAAGAGA CAAAATGCAC AGATACCCTA 300 ATTTCAGAAC TTTTCGCTCA AAATTCAAAT CCTTTGGGAA GGGAGGGACT TCTTTTGCTT 360 GATGCCAAGA AGAAATTCCC TTGACTTGAG TTGTAACCAC TAGCTAGCAA AGGGCTAGCC 420 GTCACCCTGA ACAGCCCCCT CCCGCCCCCC TGAATCCATT CTACGCCTTC CTGACAGCCA 480 CAGCGCCCAC AACGCTAAGA CCAGGACGCT AACCCTTCCG GCCCGGTTTC CCCTCCTCTG 540 GAGAAGTGGC CCAAGGAACA CCTGTGGCGC CTCTTCCCGC AGTCTCCGTA GGTCACGATT 600 CCCTCCAGCC ACCTGGGCAG TAAGCCAGCC CTTGCCACCA GCACAGGGAG CCCAAAACCT 660 GTCGCCTGGG CGCGGAGCTG GGACCGCCGA AAGCCGGGAG CACTGGGCGC CCACGCGTGG 720 GCTGACACTC GGTCCCCGGC ACGGCGTGTG GATGCGCGGG ACGAACATAG CGGGCCACCT 780 ACAGGCCCCT GGCGGCTGCG CGCACGCAGA TCTGCGAAAG CTGCCGGGCG CCGGCAGCCT 840 CGTCCGGGTG GGCGGTCCAC GCCGCGTCCC GCCCTCCCCG CGCCGCGGCC CGCGGCTCGC 900 AGCTCCTCCG GCGCCCCCCG GAGCCCGCGC GGAGGCCCGG GCAACGCCGC GCGCCGGCGA 960 GTCTCCAGCC TGGAGCTTTC GACCCCCCAC TTCCTGGTGC CCCGCGCGCC TTTTATTCGA 1020 CGCCGCCGGT GCCCCGCGCC TCAAAGGCGT 1050
|