EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-55626

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr3:52507250-52507740

Target genes

Number: 23
Name	Ensembl ID

RRP9	ENSG00000114767
PARP3	ENSG00000041880
ABHD14B	ENSG00000114779
POC1A	ENSG00000164087
ALAS1	ENSG00000023330
TWF2	ENSG00000247596
RP5	ENSG00000243224
GLYCTK	ENSG00000168237
WDR82	ENSG00000164091
RP11	ENSG00000239557
PHF7	ENSG00000010318
BAP1	ENSG00000163930
SEMA3G	ENSG00000010319
TNNC1	ENSG00000114854
NISCH	ENSG00000010322
STAB1	ENSG00000010327
C3orf78	ENSG00000168273
NT5DC2	ENSG00000168268
GNL3	ENSG00000163938
PBRM1	ENSG00000163939
SPCS1	ENSG00000114902
GLT8D1	ENSG00000016864
NEK4	ENSG00000114904

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs13094915

chr3

52507719

hg19

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_08459

chr3:52504387-52507312

Brain_Inferior_Temporal_Lobe

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I052470

chr3

52504388

52507312

Enhancer Sequence

AGCCCTGCCA AGCAGGCTGA GGCTCTGGAT CTGGGTCTTG GGTGTGCTTG GGCAGGTGGC 60
TTGGGGAGTG TGCTTTGACC TGTGGCCTGC CCCTCCTCAC CACAAGACAG CTCAGTTCCA 120
TGGAGTGGGG GCTGGGTGAA CAGGAGGATC CACCCCACTC GCTGTGCTGT GGAGGCCCCT 180
TGTTCTCCCC AGCAGTTTCC ATGACCCACA CTTTATGTTC ACCTGCCAAG CCCCAGGCAG 240
CCCTTACAGA GGAAATGGAA TTTGTGGTCC ATTGTGAGTC TGAGGGGCCA GGCACCTTTC 300
TTACTAGATA CTTCAGGGAA TGTTTGGTCG GCACTGACAC TGGGAAAAAG AGACACTTTG 360
GTCTTGAGTG GCCTCCCATC TCTGAGGATT TGGGTTGCCT GTCATTGTGC TTTTGTATGG 420
GGGTAGGAAA CACCTGCATC TGGGGACTTC TGACGGAGCA AGGATTCTGT TTCTGAGATG 480
CAGCTGTTCT 490