EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS105-55531 
Organism
Homo sapiens 
Tissue/cell
IMR90 
Coordinate
chr3:50291660-50293020 
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
KLF16MA0741.1chr3:50292465-50292476GGGGGCGGGGC-6.02
KLF5MA0599.1chr3:50292466-50292476GGGGCGGGGC-6.02
SP2MA0516.2chr3:50292463-50292480TAGGGGGCGGGGCATGG-6.79
SP4MA0685.1chr3:50292462-50292479GTAGGGGGCGGGGCATG-6.19
Number of super-enhancer constituents: 35             
IDCoordinateTissue/cell
SE_00328chr3:50272275-50294504Adipose_Nuclei
SE_00924chr3:50291098-50293375Adrenal_Gland
SE_01672chr3:50291190-50293313Aorta
SE_02846chr3:50291788-50293070Astrocytes
SE_03020chr3:50291825-50293047Bladder
SE_03205chr3:50291072-50292181Brain_Angular_Gyrus
SE_03205chr3:50292515-50293117Brain_Angular_Gyrus
SE_03917chr3:50291023-50309730Brain_Anterior_Caudate
SE_04864chr3:50290853-50293389Brain_Cingulate_Gyrus
SE_05809chr3:50271925-50313735Brain_Hippocampus_Middle
SE_06748chr3:50291149-50309964Brain_Hippocampus_Middle_150
SE_07819chr3:50290801-50293019Brain_Inferior_Temporal_Lobe
SE_08798chr3:50292004-50292450Brain_Mid_Frontal_Lobe
SE_08798chr3:50292836-50293030Brain_Mid_Frontal_Lobe
SE_09475chr3:50273514-50296642CD14
SE_13800chr3:50291252-50292835CD34_Primary_RO01536
SE_18975chr3:50291740-50292642CD4p_CD25-_Il17-_PMAstim_Th
SE_19368chr3:50291768-50293196CD4p_CD25-_Il17p_PMAstim_Th17
SE_26040chr3:50291203-50293396Duodenum_Smooth_Muscle
SE_26665chr3:50291067-50293360Esophagus
SE_29626chr3:50291140-50293278Fetal_Muscle
SE_31450chr3:50291605-50293348Gastric
SE_34830chr3:50291266-50293374HeLa
SE_36596chr3:50291271-50293499HMEC
SE_38192chr3:50288199-50299068HUVEC
SE_40718chr3:50288392-50293371Left_Ventricle
SE_42127chr3:50288404-50299583Lung
SE_48477chr3:50291098-50293461Psoas_Muscle
SE_48622chr3:50291079-50293369Right_Atrium
SE_50198chr3:50290930-50293315Sigmoid_Colon
SE_52519chr3:50291050-50293363Small_Intestine
SE_53321chr3:50290185-50294779Spleen
SE_54862chr3:50291128-50292694Stomach_Smooth_Muscle
SE_62832chr3:50263305-50298785Tonsil
SE_68717chr3:50291881-50292955H9
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 3             
ChromosomeStartEnd
chr35029241750292618
chr35029170550291872
chr35029242050292632
Enhancer Sequence
AACAGGATAG ACAGGCTAAT AGCCATTGAG GATGGCTGCA GGGGACATCC ACAGGCTTTG 60
GATGGTGTCA CCAGATAGGC TGCTGTCCCT GTACTCTAGC CTTCCCCTAT CTCTGCTTAA 120
GCCAGTCCCC TCTGACTGGA ACACCCTTTT GCTCCTATTG TTCATCCAAT CCTGAGCCTA 180
CCCATAGGGT GGATTTCAGC AAGGGTGGGT GGGAGGAGGA GGAGGGTCTT GCCTGGCTGT 240
GATTCCTGAG CCCTGTCCAA GCCACATGAA CAGCCTCCTC CTACCCTTCT TACATGGCCT 300
GAATGCTCTT GTGAATATGT ACCCCCTACA GGAGCTGTGG AGTCACAGCC AAATGCTGTG 360
GGGGCCCCCA GGCCTCACCA CTGCCCCTCC CTGAGATCTC TGGCCCAGCC ACCAGCGAGC 420
TTGGGGTCAG AGCAGCAGGG ACCTTGGTGC CCATGATACT CAAAGGAAGC AGGAATAGAG 480
CCACCTCCAG GCCACCTCCT GCTTCTCCAT CATCCTCTTT CTCTATTCTC CAGACATTAG 540
GCACCCACTG TGTGCCCAGC ACAGTTTTGG GAGTGAATAC AGGCCCTGTT CTCCCAGTCA 600
GGTTTAAGCC TTGATAGCTC CCCCTGGGAA TGGGTTGCGG ATTGGAACAC CACAGGAAGC 660
AGGGCTCCTT CAGCCCCTCT TCGCAGCAAC CCTCCAAGTG TGCAGCGAGT CAGGGGGTCC 720
CTGGGGCGAA CCCACCTGTT GGGGAAAAGG GAGAGGCTGG TGTGGAATGC ACCATGGTAC 780
CTCCACATTG AGGACTCTGG CAGTAGGGGG CGGGGCATGG TATGCGGGTC ACAGCACATG 840
CGTCATCCTT CCCCATGGCC CTTCCTGTTT TTCTGTTTTG TCCCTGCTAC TCTGAGATCA 900
TTTCCCTCTG GCCTGGTTTG GCCTGGGTGC TGGTGGGAGC CAAGGGCCAG CCCCAGCAGC 960
CTTGCCCCAG GAATGAAAAG TCAGCTCTGG GCAGCAGCCT GGAGGCCTGG GACCAGCCTC 1020
CAGGGCATGG CAGGGATATT GAGGCAGGCA GCAGAGGCAG GCCCTGCAGG GGTAGCCTTG 1080
ATACTAATTA AGGGAACTGG TAATGAGGAG CCCCTGGGAC CCCTGCCAAG CAGGTGTCTG 1140
TGCCCTCCCC CTGAGGAACC CAGATTTCAT TGGGCGCTGG GCAAAGAGCC CACTGGACCT 1200
GGCAGGCCCC AACCTGTCCA GCACCACATC GAGGGACCGC ACCCGGCTGC TCTGCGGCTA 1260
ATGCCGTAAT TGCGCCCATT AGCATCCTGA ATCCTTCACC GAAGGACTAA TTTGCCTCCT 1320
CCCACCCTCT TTGCCTATAG CTCCAACATC CTGGATCCTG 1360