EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-55528

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr3:50268430-50268590

Target genes

Number: 19
Name	Ensembl ID

RBM5	ENSG00000003756
SEMA3F	ENSG00000001617
RP11	ENSG00000235016
GNAT1	ENSG00000114349
SLC38A3	ENSG00000188338
GNAI2	ENSG00000114353
U73169.1	ENSG00000213600
SEMA3B	ENSG00000012171
IFRD2	ENSG00000214706
NAT6	ENSG00000243477
HYAL3	ENSG00000186792
HYAL1	ENSG00000114378
HYAL2	ENSG00000068001
TUSC2	ENSG00000114383
RASSF1	ENSG00000068028
ZMYND10	ENSG00000235058
CYB561D2	ENSG00000114395
NPRL2	ENSG00000114388
TMEM115	ENSG00000126062

dbSUPER

Number of super-enhancer constituents: 11
ID	Coordinate	Tissue/cell

SE_03917	chr3:50267502-50268940	Brain_Anterior_Caudate
SE_04864	chr3:50266606-50268798	Brain_Cingulate_Gyrus
SE_05809	chr3:50263282-50269067	Brain_Hippocampus_Middle
SE_06748	chr3:50266820-50268774	Brain_Hippocampus_Middle_150
SE_07819	chr3:50266638-50268957	Brain_Inferior_Temporal_Lobe
SE_09475	chr3:50264158-50269085	CD14
SE_26665	chr3:50264266-50268486	Esophagus
SE_42127	chr3:50267153-50268633	Lung
SE_50198	chr3:50266604-50268705	Sigmoid_Colon
SE_53321	chr3:50267117-50268707	Spleen
SE_62832	chr3:50263305-50298785	Tonsil

Enhancer Sequence

GTTTGTTTCT TCAGCTCTCA GCCTTAATTT TCTCGCTAGC CCTTCCCCAG ACCCCTGCCT 60
CTCAGACCTA CCACCCTACC TTTGCATGTA CTCTTCCATC TTCTTGCAAT ATTCTTCCGC 120
ACTGTTCTTC TCCCTCTAGC ACTCCCTGCA TCACCTCCTC 160