EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-55422

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr3:48693800-48694130

Target genes

Number: 30
Name	Ensembl ID

ZNF589	ENSG00000164048
CTD	ENSG00000228638
NME6	ENSG00000172113
FBXW12	ENSG00000164049
PLXNB1	ENSG00000164050
CCDC72	ENSG00000232112
CCDC51	ENSG00000164051
RP11	ENSG00000244380
ATRIP	ENSG00000164053
TREX1	ENSG00000213689
SHISA5	ENSG00000164054
PFKFB4	ENSG00000114268
UCN2	ENSG00000145040
COL7A1	ENSG00000114270
UQCRC1	ENSG00000010256
TMEM89	ENSG00000183396
SLC26A6	ENSG00000225697
CELSR3	ENSG00000008300
NCKIPSD	ENSG00000213672
IP6K2	ENSG00000068745
PRKAR2A	ENSG00000224424
P4HTM	ENSG00000178467
WDR6	ENSG00000178252
NDUFAF3	ENSG00000178057
DALRD3	ENSG00000178149
IMPDH2	ENSG00000178035
QRICH1	ENSG00000198218
QARS	ENSG00000172053
LAMB2	ENSG00000172037
CCDC71	ENSG00000177352

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr3:48693918-48693932	GGACACGCCCCTTC	+	6.03
KLF16	MA0741.1	chr3:48693938-48693949	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr3:48693938-48693948	GCCCCGCCCC	+	6.02
SP1	MA0079.4	chr3:48693935-48693950	CTGGCCCCGCCCCCT	+	6.57
SP4	MA0685.1	chr3:48693935-48693952	CTGGCCCCGCCCCCTCC	+	7.25

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I048654

chr3

48692421

48695260

Enhancer Sequence

GGGGGCCAAG CCGCGGTCAG AGGCGGTCAC GCCCACGCCC GCCCCTGCTC CGGCCCCTTC 60
AAAGACCGCG CGCCCAGAGG CCGGGTGCCA AGACCCCCGA AAGGTCGCCC TCTTCGGTGG 120
ACACGCCCCT TCCGTCTGGC CCCGCCCCCT CCCCAGTCTC ATCGCTGCCT CGGCGGCGGC 180
CCCTTCCGGC CACGCTCTAC GGCTTCTGGC CTAAGCGCGT CCATACCAGG CCGTGGCCTC 240
AGAAGTGACT CCCAGTACTC ACTCGCATTG TGGTCCCGCC CCCAGCCTTG GCCCGTGCTT 300
CCCCCAGCTC TGGCCCGGCG CCCTGCTCAC 330