| Tag | Content |
|---|
EnhancerAtlas ID | HS105-54272 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr3:10238010-10239460 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr3:10239073-10239094 | AAAAAAAAAGAAAAAGAAAAA | - | 6.09 | | Nr2f6(var.2) | MA0728.1 | chr3:10238845-10238860 | GAGGTCAGGAGTTCA | + | 6.22 |
|
| | Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
| SE_05284 | chr3:10230421-10238972 | Brain_Cingulate_Gyrus | | SE_06271 | chr3:10230310-10239221 | Brain_Hippocampus_Middle | | SE_07281 | chr3:10230345-10238980 | Brain_Hippocampus_Middle_150 | | SE_08553 | chr3:10230394-10238941 | Brain_Inferior_Temporal_Lobe | | SE_10483 | chr3:10232905-10238935 | CD19_Primary | | SE_11117 | chr3:10230364-10244148 | CD20 | | SE_12182 | chr3:10233126-10238474 | CD3 | | SE_18222 | chr3:10230393-10242416 | CD4p_CD25-_CD45ROp_Memory | | SE_18887 | chr3:10230456-10239154 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19527 | chr3:10237958-10239423 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20302 | chr3:10232846-10239394 | CD56 | | SE_22972 | chr3:10232902-10238955 | CD8_primiary | | SE_35045 | chr3:10239193-10242641 | HeLa | | SE_46480 | chr3:10232852-10239588 | Osteoblasts | | SE_55870 | chr3:10232869-10239613 | u87 | | SE_58615 | chr3:10208482-10269048 | Ly1 | | SE_62498 | chr3:10211834-10316085 | Tonsil | | SE_67695 | chr3:10232869-10239613 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH03I010188 | chr3 | 10230458 | 10242599 |
|
Enhancer Sequence | CTGGTCCAGA ACTCCTGACC ACAGGTGATC TGCCCTCCTT GGCCTCCCAA AGTGCTGGGA 60
TTATAGGTGT GAACCACTGT GCCCGGCCTA GGGACTGTTT ATTCTCCTCC TGGGCCTGTG 120
GAAGGCAGTG GGATGCCATG AGGCAGACAG TGATCCTGTG ATTCCTGCAG GCAAGGCCCT 180
TGTTGGAGAG AAACTGGCTT CTAGACTCCG AGTTTCAGCC ACAAAGGCCT TGGCCTGATG 240
GCAATCAGGA TGGGGGGGTG TGGCCTATAG AACCACTGAA GTGCCCGTGG AGCCCAGGTT 300
GGGAGAGAAG TGCATGTTCT CTGGGTGCCC TTACGTCAGT GGTTCTGGGA GGAGACCCCG 360
CCTTCCTGCC TCAGTGCTGC CTGCCTCCCT GTTTCCCTTG GGCAGGTCTT GTTCCCCGCT 420
GAGCCTCAGC TTCCTGACTT GAGATCTCCA GGGTTGTGGG GAGGGTGCTT GAATTGAACG 480
TATCAATACA CAACGTGGAC ATTCGTTGGT GAAAAACAGA AGTGAGGTGG ATCTGAATCT 540
CATGAAGGGC TGATTCATCG TCTGCTCACT GGAGCCAGAG GGGTCCCCAG GGCAAACGCT 600
ACTCACACTA GCTTGGAAGA CTCAGTTCTC GTCATTACTT TAGCTAGCTT GCTAACTGAT 660
TTTTTTTAAA AGAAGTATAC TTTACTGTGT AAATAATGCA TAATGATTTT GTTGAAAAAT 720
TCTATGATAT GAATAAATCA CAAAGAAAAA AACCCCACAA TATAAAACAG GCCAGGCGCG 780
GTGGCTCATG TCTGTAATCC CAGCACTTTG GGAGGCCGAG GCAGGTTGAT CACTTGAGGT 840
CAGGAGTTCA AGACCAGCCT GGCCAACATG GTGAAACCCC ATCTCTACTA AAAATACAGA 900
AAAAAAAAAT TAGCTGGATG TGGTGTTGCA AACCTGTAAT CCCAGCTACT CAGGAGGCTG 960
AGGCAGGAGA ATCGCTTGAA TCCAGGAGGC AGAGGTTGCA GTGAGCCGAG ATTCCTCCAC 1020
TGTACTCTAG CCTGGGCAAC AGAGTAAGAC TCTGTCTCAA AAAAAAAAAA AAGAAAAAGA 1080
AAAAGAAAAC TAAAAGACTC TCATCCTACT CTTCTTATCC TCAATATGTG GACTATTTAA 1140
GAGATAACCA ATATTTTAAG ACTATAACCA CCACAGAAAT AAAGGTCCCA TATTTTGAGC 1200
TAAGCAGTGT CTCCATTAGT CTTCATAAAA GTTGTCCAAA GGAGGGCCGG GCATGGTGGC 1260
TCACACCTGT AATCCCAGCA CTTTGGGAGG CTGAAGAGGG CGGATCATGA GGTCAGGAGA 1320
TCGAGACCAT CCTGGCTAAC ACGCTGAAAC CCTGTCTCTA CTAAAAATAC AAAAAATTAG 1380
CCGGGTGTGG TGGTGGGCGC CTATAGTCCC AGCTACTCGG GAGGCTGAGG CAGAAGAATG 1440
GCGTGAACCT 1450
|
