EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-54240

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr3:9945090-9945440

Target genes

Number: 33
Name	Ensembl ID

THUMPD3	ENSG00000134077
SETD5	ENSG00000168137
LHFPL4	ENSG00000156959
MTMR14	ENSG00000163719
CPNE9	ENSG00000144550
BRPF1	ENSG00000156983
OGG1	ENSG00000114026
CAMK1	ENSG00000134072
ARPC4	ENSG00000241553
TADA3	ENSG00000171148
TTLL3	ENSG00000214021
RPUSD3	ENSG00000156990
CIDEC	ENSG00000187288
JAGN1	ENSG00000171135
IL17RE	ENSG00000163701
IL17RC	ENSG00000163702
CRELD1	ENSG00000163703
PRRT3	ENSG00000230082
AC034193.5	ENSG00000180385
AC022007.4	ENSG00000232901
TMEM111	ENSG00000125037
AC022007.5	ENSG00000206567
CIDECP	ENSG00000186162
FANCD2	ENSG00000144554
C3orf24	ENSG00000163705
BRK1	ENSG00000254999
VHL	ENSG00000134086
IRAK2	ENSG00000134070
TATDN2	ENSG00000157014
GHRLOS2	ENSG00000231177
GHRLOS	ENSG00000240288
GHRL	ENSG00000157017
SEC13	ENSG00000157020

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx	MA0467.1	chr3:9945379-9945390	GAGAGGATTAG	+	6.02
SP8	MA0747.1	chr3:9945127-9945139	CCCACGCCCACT	+	6.14

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_29497	chr3:9937515-9945759	Fetal_Intestine_Large
SE_32055	chr3:9943205-9945406	Gastric
SE_35345	chr3:9942646-9945596	HepG2
SE_50748	chr3:9943037-9945433	Sigmoid_Colon

Enhancer Sequence

TCACTGGTGA GTCGCATTTC CTGCCCCATT GCTCCTCCCC ACGCCCACTA TTTTTGCAGA 60
TGCCTAGCAA GCCCTCCATT CTAATTTTCA GTTCCCAACC CGGGAAGTAG CACAATATCA 120
AGGAAAAATT TGGAATCATG ACAAGCCTGG GTTCACATTG CAGTTCTGCC AGACTCCCGT 180
GTGGCCTCAG ACTGTGCACC TAACCCCTCC AACTGACCCT CAGTTTCTGA GGGGTAGTAG 240
CATAGTAGAA ATGATTGTAC ACTAAAGGCA GTGTTGCTTC TGATCTGTAG AGAGGATTAG 300
ATGAGAAACA TGAGTAAATC TCCAGGTTCT CCATATATGT TGGCTCCTCC 350