Tag | Content |
---|
EnhancerAtlas ID | HS105-52415 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr22:20921100-20922800 |
Target genes | Number: 10 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr22:20922420-20922439 | CCCTGCCCTCTGCTGGCCG | - | 6.93 | HNF4G | MA0484.1 | chr22:20921540-20921555 | GGAGAACAAAGTTCA | + | 6.08 |
|
| Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
SE_00966 | chr22:20921556-20924404 | Adrenal_Gland | SE_02184 | chr22:20921609-20924437 | Aorta | SE_04597 | chr22:20920711-20922283 | Brain_Anterior_Caudate | SE_05425 | chr22:20920672-20921939 | Brain_Cingulate_Gyrus | SE_06221 | chr22:20919386-20922011 | Brain_Hippocampus_Middle | SE_08018 | chr22:20920372-20922017 | Brain_Inferior_Temporal_Lobe | SE_08018 | chr22:20922268-20924242 | Brain_Inferior_Temporal_Lobe | SE_12414 | chr22:20921512-20922186 | CD3 | SE_14430 | chr22:20919479-20924672 | CD4_Memory_Primary_7pool | SE_15690 | chr22:20920458-20924473 | CD4_Memory_Primary_8pool | SE_16601 | chr22:20920443-20922316 | CD4_Naive_Primary_8pool | SE_16601 | chr22:20922428-20924657 | CD4_Naive_Primary_8pool | SE_18628 | chr22:20920895-20924571 | CD4p_CD25-_Il17-_PMAstim_Th | SE_20611 | chr22:20919174-20924658 | CD56 | SE_22152 | chr22:20919584-20924494 | CD8_Naive_8pool | SE_22532 | chr22:20919250-20924490 | CD8_primiary | SE_36960 | chr22:20919783-20925974 | HSMMtube | SE_41024 | chr22:20922485-20924439 | Left_Ventricle | SE_43192 | chr22:20919692-20924617 | Lung | SE_44170 | chr22:20919337-20924691 | NHDF-Ad | SE_44919 | chr22:20920530-20924794 | NHLF | SE_45715 | chr22:20920543-20924670 | Osteoblasts | SE_48421 | chr22:20922486-20924459 | Psoas_Muscle | SE_48978 | chr22:20920989-20924419 | Right_Atrium | SE_51756 | chr22:20920754-20924619 | Skeletal_Muscle_Myoblast | SE_53780 | chr22:20920564-20922269 | Spleen | SE_53780 | chr22:20922320-20924418 | Spleen | SE_63544 | chr22:20920511-20924668 | HSMM | SE_65524 | chr22:20920838-20921536 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH22I020562 | chr22 | 20917106 | 20926342 |
|
Enhancer Sequence | ATTTGTGAGT ACCTGTGGCC CACAGTGGAG CACATGCAGC CCGTGGCTCT GTCAGCAGTA 60 GTTTCTAGGC TCTTTGGCTA GAGATAGCAT ATCCTATTCT TCAAGTGCTG AGACTTCAGG 120 CAGCCCCCAC CCCTTGCCAG CCCTGCCGAC TCTAGCATGG CTCAGCAGGG AAGCATGTGT 180 TTTGCATTTT GTGTTCTGAG AGCTGCTTCT GCACCCCGCA CAGGGTACTG CTGCTGCTAC 240 TGGGGCACCA AGTCGCATTC CAAGCAGTGT GGCTGATTGC AGCAGTTCTG TGGGCCCTTT 300 CAGGGTGTGA GCACTTCGAC TGATGAGCAC CACATGAAAG GATGTGCCAG CTCCGTCAGT 360 GTCTGGTGGT TTGCCAACTA CTCAGAGTTA ATGTTCTAAG CAAATATCTT TTTTTTTCCT 420 TTACACTCTG CCAAGTCTCA GGAGAACAAA GTTCATTACT ATATTTTTGA GAGGAGTATT 480 AATATAAAAT ACTGTTATTC CTAGTTTCAT TTTGTATCTC TGCACAAAGC CAGTCTACTC 540 AGTGACAGGC ACAGAGGACA GAGTATGATC ACCAGGATGA AGGTAGCTGC ATCAAGGGGC 600 CATTTGGACA ACTCTTTGGC TCCCTTGGTT TTTGTGGCCT TTTCTGTTTG TGATTCATGA 660 GTGGAATGGG GCCTGAGGCA AGTGTGGGGG TGAACAAGAG GCCTCATAGG CAGACTGGAA 720 GTCTAGGAGA GTTGTGAGGA GCAGATATGC TCACTCATCT GTCACCTGGG AGTCGACACA 780 CTGCCTGACC CCGGGGACTG TGCAGACTGA AACCCTTGTG TGCTGCATGG TGGAATGTGC 840 CCTGGCAGGG TTTGCCCTAG TGGCTTGGAG ATGTCTAAGG AAGAGCCCGC TGCATGTTGG 900 AATGTGCCCT GGCAGGGTTT GCCCTGGTGA CTTGGAGATG TCTAAGGAAG AGCCCCCTGC 960 ATGGTGGCGC GGGCCTGTCT CGTCCTTCTG GAGGCCCCTC CATGCAGTGG CTCCACAGTT 1020 GCCCCTTTTG CCCAAGTTTG CCCCCCACCC CCACTTTTTT CTTTTGAAGA CAGGGTCTCT 1080 GTTTTCCAGG CTGGAGTGCA CTGATGTGAT CAGACCTCCC TGCTCAAGCG ATTCTCCCAC 1140 CTCAGCCTCC CAAGTAGCTG GGGCTGCAGG TGTGCATCCC CACACCTAGC CAAATTTTTG 1200 TATATTTTGT AGATATGGGG TTTGGCCGTG TTGCCCAGGC TAGTCTTGAT CTCCTGGGCT 1260 TAAGCGATCC ACTGGCCTTG GCCTCCCAGA ATGCTGAGAA TACAGACAGG AGCTACTACG 1320 CCCTGCCCTC TGCTGGCCGG CTAACCCAGC TTTCCTTCAA GGAATCAGGC TGAGTGAAGC 1380 TCTTGTGGAC CATCAGCATG CTTGGCCCAG AGGATGAGCA GGCTAGGCTG TAAGCTCTGC 1440 ATTGGAAGTC GTCAGTGCTT GTGATAGCTG GTGCTGAGGG ATGTGTGGAG ACATCCCAGT 1500 GGGAGGGCCA CATTGCCACT TGCCAGAATT GGATTTGAGC TAATGGGATC CTAGATGGCC 1560 AGTAAGGTGA CATCACAGCA CATGAGGTCA TGAAAGTCCC ATTCCTCACC TCAAGAAAGG 1620 CTCCATTTCC TAAGCTTCCA CAGGAAGACT AGGCTCTGCT CTCTGACCCA GGTGGTTCCA 1680 AATCACATTC TCTCTTTCTC 1700
|