EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-51033

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr20:62273650-62274360

Target genes

Number: 16
Name	Ensembl ID

ARFGAP1	ENSG00000101199
EEF1A2	ENSG00000101210
PPDPF	ENSG00000125534
GMEB2	ENSG00000101216
CTD	ENSG00000232442
STMN3	ENSG00000197457
RTEL1	ENSG00000258366
TNFRSF6B	ENSG00000243509
ZGPAT	ENSG00000197114
ARFRP1	ENSG00000101246
LIME1	ENSG00000203896
SLC2A4RG	ENSG00000125520
RP4	ENSG00000229299
ZBTB46	ENSG00000130584
TPD52L2	ENSG00000101150
DNAJC5	ENSG00000101152

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_34418	chr20:62273315-62276162	HCT-116
SE_43229	chr20:62273367-62274229	Lung
SE_53598	chr20:62269537-62274362	Spleen
SE_55240	chr20:62269587-62274223	Thymus
SE_57660	chr20:62273518-62274223	VACO_503

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH20I063638

chr20

62269643

62274669

Enhancer Sequence

GTCTGTGCGG GGCCGGCGGG CGCGCGTGAG CGGCAACCCC GGGCCCTGCC CGGCCGGACT 60
CCTCCCTGCT CTCCGCCTCC CGCCCAGCGC CCGCTCGCCT CACCTGGCGC CTCCACCTGC 120
CCAGGCCTCG GTGGGCGCCG GGACCCCCGG GCGCTGCCCT GGGAACCCTC GCCTGCCATC 180
CGGCCTGTGG TCGGGGCAGG GCCAGGGGGT CGCGATCCGC CGCCCCCGCC CCCGTCCCTG 240
CCTCGCGCGC GGGTCCCGCG GTCCTGGCTG CGCCCAGGGC CCCCGCCATA CCCTGCCGCC 300
ACTGCACACC CTGCCCTGCG CGTCTGCCCC TCCAAGGACC AGCAGCAAGA AACCCTAAAC 360
TTGTGGGCGG TCTCTGAGCT TTGTCTCTTC CTCGGACATC CGCCCACTGA GCAGAGTAGC 420
TGCTTGTTAC ACACCGGGTT CCCAGCTCCC AATTAGGTGC CCAGGAGCGG AGGGTCCCCA 480
GGGATGCTGG GGGAGGGGCC GGCTGGTGAC CCCTGGGAGG AGAGCGGGGC AGCAGGACCC 540
GCACCCACAT GCCAGTCCCT ACTAGTCAGC CCTGTGAACC CTGGTCTCTG GCCTCACCGG 600
GAAGGGAACG GAGCCGCTTC CCCTGCCCAA TGCGTTGGCC TCCAGGGTGG CACCCCCAAA 660
AGGACATTTT TATCTCTGTT TCAGTCTCAG AGGGGCTGGT GGGAGGGGAG 710