| Tag | Content |
|---|
EnhancerAtlas ID | HS105-50996 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr20:61531050-61533080 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr20:61531772-61531791 | TGGCCACTGGGTGGCACCA | + | 6.89 | | Nkx2-5(var.2) | MA0503.1 | chr20:61532646-61532657 | CTTGAGTGCCT | - | 6.14 |
|
| | Number of super-enhancer constituents: 2 | ID | Coordinate | Tissue/cell |
| SE_23696 | chr20:61529066-61533061 | Colon_Crypt_1 | | SE_41661 | chr20:61531212-61533070 | LNCaP |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr20 | 61532871 | 61532946 | | chr20 | 61531200 | 61531650 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I062898 | chr20 | 61529521 | 61533045 |
|
Enhancer Sequence | CTCATCTGTG CTTTAAAGAG CATGGAAATG GGCAGTCAGG TGAGTGAACG GCAGAATGTT 60
CCAAGCCGGG CCTCTGGGAG CAGTGTCCTA CAACACGCAG AAAGCCCCAT TCCTGCTCTG 120
AACGGACATG TTCTATCCAG CAACTGTTCC AGGGACCCGA GCACACACCC ATTCCACTCC 180
AGGTGGGACA GCATGGCTGG TGCTCAACTT GGGTCAGCTG CTGCTGAAAT GGGGACAGAA 240
ACTTTTTAGT GGAGCTAAAA TTCAATTTGC AAGTTCATCC AAATTTGCTT TGAACTATTA 300
CGTTGTGTAT AACTTCAGAG AAGGGCAAGC AGCAACTCCA GGCAACCCAG GAAAAAACCC 360
CACTGCAGAA ACACAGGGCT CTGTCAGGGT ACGAGCCTCC CCTACACGCT GCTGGGCCCC 420
CTGGGGGCAG CAGTGGTGGT GACCTGGTCA CACCGCACAG CACTGATGCC TGAGAGCCAG 480
GGGTCCCCTG CCCCTCCCCA CACCTCTCTG CCCCTTGGTC GCAGTGCTGT CTCCTTTAGC 540
TCCCACATTC TGGGGGCCTG CCCAGGCCAC TGGCCCAGAT GAAACTGTTG CTGCCGGGTC 600
TGGGTTTCAG CCAACTGCAG AATGAAGCAG GTCGTCGTCG TGCACAGGGA TCAGCAGCAC 660
ACTCTAATTG GCCAATTTCC CCCAAAGCAG AAGGCTGGCT GGCTTGGGTG CTACAGCGCC 720
TCTGGCCACT GGGTGGCACC AGGGCCTGAG CAGAGACGGG GAGGAGAAAA TCAGGCCCCC 780
ACTGGAGGAT GGTGCTACTC CGCTCCTCTC TGCAGAACCC ATCCAATTGC CCCAGTGGAA 840
GTTTTAGCAG GACAGGGATT AAAATATGGG GCAAGAGACC AAGTCTGCTC AGTTCTGGAC 900
TGTCCAGAGG CCCCCATGTA GCAACCTTAT GTGCTGGATG GCTCCCCACA GGGAAAGGAA 960
CTGGTTATAA AAATCACTAA AATAAACACC ACACGCCCTC ACGTAGGTGT TGACAATGAA 1020
GTGGCCTGCC CTGTCGCGGT ACTGCTGGCT GGTTTAGGGA AGCTGGGGCA CTCAGACCTC 1080
CACTGGTCTC CCACGGTGTC CTGAATCCTG CCTATCACCA TCCGCTACAG CTCTAAGGGC 1140
TGTTTCTATG CTATGCACCT GAAAACAGAC TCAACAGTCA GTGAAGGAAC TGTGGAAGTA 1200
AATTCTGTTC ACTGTGACGT CAGGCCTATT TGCAGCCCTC AGTGAGGCGT GTGTACAACA 1260
ATGCAGTTTC CTGCTTTACC TGTTTCTTCA CTCCAAGATT GCCCCTAGTG GGAACAATCA 1320
AGGTGGCAGC GGCAAGAGAA AATGTTCTGC TTTTGCTCCT CTCAACATGC TAGAATGTGT 1380
TCACATGAAT TCGCCTTTTA TAAGTAGTTA CTAGTTTGCT TTCATGTTGC GGGGAAACAG 1440
TTACTTCCCA AATACAGCAG GCAGACTACA TCGCAGACGC TCCTCAGAGG AGACCATCAC 1500
TACAGCCAGG ACGCCCTTGC AGGGTCCACA GCTAGACTGC CGTGTTTTGG AATACTCAAA 1560
GCTTTCCTTG GTCAGTTTTC TTACTAATAC CCGCTACTTG AGTGCCTTCC AACTTAATGG 1620
AGAGGTGTGT AATTCTCCCT AAGAAACTCG TGTGATGAGG GCCACGTGGA CAGATGGACG 1680
TTCCACTCAA CTGCAATTTC AGTTGTGCCC AGCTGCACAT GGTGTGTGCC TGGCTGCCAA 1740
GCCCATTTGG GAGCAGAGCT GCTGCTCTTC CCAAGATCTC CCACACGAGT AATTTAACCT 1800
TTATCTAAGT TGTTTACTAC TTAAACCAAC ATGTTAGGGG CATGTTAAAA TTAGTCCACA 1860
ACCCTCCCCT GTAATCCCTC CAGTCCTAAA GGGCCATACT CAGTATAAAG CCCCTAGCTG 1920
ACAGCACCAA GCAGGTCAGT TGAGGATAAA GCCAGTTACC TTAAGCTCTT CTTGCCGAAC 1980
TCTTCCAGGT TTGCGGCAAA TGAAAGTTGC CGCAACCTTC ATTTAAATAA 2030
|
