Tag | Content |
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EnhancerAtlas ID | HS105-50522 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr20:49055440-49059010 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
BHLHE41 | MA0636.1 | chr20:49058365-49058375 | GTCACGTGAC | + | 6.02 | BHLHE41 | MA0636.1 | chr20:49058365-49058375 | GTCACGTGAC | - | 6.02 | MITF | MA0620.2 | chr20:49058361-49058379 | CTGGGTCACGTGACCACC | + | 7.12 | MITF | MA0620.2 | chr20:49058361-49058379 | CTGGGTCACGTGACCACC | - | 7.12 | Mafb | MA0117.2 | chr20:49056274-49056286 | AGTCAGCATATT | - | 6.52 | Nr2f6(var.2) | MA0728.1 | chr20:49056841-49056856 | GAGGTCAGGAGTTCA | + | 6.22 | Nr5a2 | MA0505.1 | chr20:49056849-49056864 | GAGTTCAAGGCCAGC | + | 8.25 | RARA | MA0729.1 | chr20:49056841-49056859 | GAGGTCAGGAGTTCAAGG | + | 6.73 | STAT3 | MA0144.2 | chr20:49058321-49058332 | TTTCCCAGAAG | - | 6.62 | USF1 | MA0093.2 | chr20:49058365-49058376 | GTCACGTGACC | + | 6.14 | USF1 | MA0093.2 | chr20:49058364-49058375 | GGTCACGTGAC | - | 6.14 | USF2 | MA0526.2 | chr20:49058361-49058377 | CTGGGTCACGTGACCA | + | 7.69 | USF2 | MA0526.2 | chr20:49058363-49058379 | GGGTCACGTGACCACC | - | 7.88 |
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| Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
SE_00918 | chr20:49055454-49057748 | Adrenal_Gland | SE_00918 | chr20:49057773-49058639 | Adrenal_Gland | SE_03055 | chr20:49055477-49056538 | Bladder | SE_03055 | chr20:49057830-49058401 | Bladder | SE_31629 | chr20:49055402-49056597 | Gastric | SE_31629 | chr20:49056618-49057629 | Gastric | SE_31629 | chr20:49057673-49058675 | Gastric | SE_34001 | chr20:49055295-49058558 | HCC1954 | SE_35076 | chr20:49055128-49058839 | HeLa | SE_36034 | chr20:49054845-49058832 | HMEC | SE_42215 | chr20:49055461-49056626 | Lung | SE_42215 | chr20:49056844-49058813 | Lung | SE_48118 | chr20:49056153-49058331 | Psoas_Muscle | SE_51230 | chr20:49057316-49058890 | Skeletal_Muscle | SE_52679 | chr20:49055432-49058808 | Small_Intestine | SE_64485 | chr20:49055004-49058700 | NHEK |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 49055532 | 49055924 | chr20 | 49058248 | 49058472 | chr20 | 49057048 | 49057261 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I050438 | chr20 | 49054830 | 49059838 |
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Enhancer Sequence | TCCATCTAAA AAAAAATAAA ATAAAGTATA TGTTTTAAAA ATTCAGAAGG TTTGGCTACA 60 TGGCTCCCAC ATTTTTACAG GACCATGATG GCTGCAGTGA GTTCCAGGTG CCTCCATAGA 120 TAAAGCGTGT GTGCCCGAGC CTGTCGGTCC CCTGAGACTG CCTCCCTCTG TAGCATCAGC 180 CAGCCAGTCC CCGCAGGCAC CTGAGCAATG ACTCAGGCAT GAAGGGGATT CTTTGGAAGT 240 TCCTGGTGAG AAAGAGAACC GGGTGAAAGT GTGGCCTGCA GGAGTGGCCA ATGAGGAGCA 300 AAGAGGAGGG TGACACCCGC CTGTGTCAGC TCCTGCTCAT CATCTCCCCA GTGGGAGCCT 360 CCTGTGCACT TTCCACAGGA CCGAGTGAGC CACTCTTGAT TCACCCTTCC TCTGCCCAGG 420 CCTGCAGTGG GCGGGTGCCC ACCGTGGTAC ACAGCCCATG AAGCAGCCAC CCTCTGCCAC 480 TGAGGCTTGG CAGTCTGAAT GGATGCCAGC CTATGAGATT AGAAGGAAAA TGGGCAGGAT 540 GTGAAAAATC AGAAGCTGCC TGACTACTCC TGGGAAATTG TTCCTGAGAC CATGCCCTTC 600 CTGCGTCTAC TTGTAGCATC GCTCTTTCAC TGACAAGCAT GTATCGAGTA CTAGGCAAGT 660 CCAAAGGAGG TCTTGAAGTA GATACAGCAG GACAGGCAAG AGGCTGGTTC CATGGCCAGC 720 TGCTGTTTGT ACCTGACCAA TGTTCCTCCC CCATGTTCCG GTAACAGCAC CCTTCCACCA 780 CTATCACTCC ATGTGCCTCC CCAACCAGAG GAGGTGGATG AATGAGGCCT GGGAAGTCAG 840 CATATTCCAT CCCCCCGGCC CCAGGGATTG GTCTGAGATG GGTATGTGAC CCAAGTCTGG 900 CCAATCACAG TCAACCCCTA GACATGTGCT GAGGCTACAC AGAAAGTCAG CTTCTGCTCA 960 CTTGGCTTGT CGATCTGGCA GAATGGAAGC TGGGGGATAC TGGGGACTAT TTTTGCCACC 1020 ACATAAGGTG ACCCTAACTG ACACGGAGGA AAACAGAACC AAGAAGTGGA AACAGCATGA 1080 TTCCTAAACA ACAGATGCAC ACCTGGATCC AGCCATTCCT GAAGCTGAAG GTCTTTTCAT 1140 TTAAATGAAC CAAAACATTC ACAGAAACAC ACACTATTTT TTTTCTTAAG TCACTTTGAG 1200 TTGGGTTTGT TTCTGTCACT TTCAACCAAA AGACCCTGAC TATACAAGTG GATGTATAGC 1260 TGTTTCCAGG CTGGAAAACA AACAGCTATG GCAAAAGCAG ACCATGAGAC ATCCATGTAA 1320 AATCTGGGAG TTGAGGGCTG GGTGCAGTGG CTCACACCTG TAATCCCAGC ACTTTGGGAG 1380 TCTGAGGCAG GTGGATCGGT TGAGGTCAGG AGTTCAAGGC CAGCCTGGGC AACATGGCAA 1440 AACCCTGTCT CTACTAAAAA CACAGAAATT TGCTGGGCGT GGTGGCATGC ACCTGTAATC 1500 CCAGCTACTG GGGAGGCTGA GGCACAAGAA TGGAGAATTG CCTCCCTCTG AACTTTTTAT 1560 TTGGTGCTAT AAATAAACCC TTTCAGGTCT GAGCGGCAGT CAGGTGGATT TCCAGTTACT 1620 TGCAGCTGAA TGCATTTCTA CCTGTCACTC CTCCTCAGGA CCATAGGTTG CTCTGGATTC 1680 CCACCACACA CGTGGAGATA CTGAGGTCTG GAATGCAGAG AAAACTTCCC CAGTGTCACG 1740 TGGTGGAGTC ATGAGTTTAC TGACTCACTA CCCAGTGCTC TTTCCGCTCA AGACAACCTC 1800 GTGGTCCGTT CCTTTCATTC GGGCTGCTGT ATGCATGGCC AACAGCTGCT TTGTAAATTA 1860 AACACTTCCC ATGGAGGCAG TGATGATGAT GACCTTGCCC CTGAATCTTT CCAGCCTCTT 1920 ACGTAAATCG CCCCTGGGTC ACTGTCTCCA TGCCTTTGGA CCCAGGACAG CTTCCCCACA 1980 TCCTTTAAAA CGATGAGATA ACCACATGTA AACCCAGTGC TCCTGGAAAG GTGTGAGTCA 2040 TGCATCACGG AACAGAAGGT TCACAGCCAG GAGTCCGCCT ATCATGCTTG TCATCCAGCC 2100 TTCCAGGCTT GCGTGGAGCT TGTTCACTGC AAAGCTGATT CATCTGCAGC TTGTGGTCAG 2160 CTCTGACACT CAGATCATTT TCTGCTCATC TTGTGCCTGG CTAGTGACCT TTAATTAGGT 2220 GCTGTCAACT TCCTGTCTTC CTGTCTCTGT CCATGTTGTC TTTCCCCCTA TTTTAAAAGG 2280 ACTGTATGAA TACTAAAGAC ATGATGATGA TGATAGCAGT TAGCACTTAC TATATTCTAA 2340 ATGCTCTATA TAAATTTAAA AGTTGTTTCT CAAAAGCCAT TGTCTGAGAT AACTAGTATT 2400 ACTATTGCAG TTTTATGGAT TGGAAAACAA GGGCTTAGAA AAGTGAAGTC ACTTTCCTTG 2460 GGTAACAGAG CCAGGAGTAT TTGGTGGAGC TGGAATATGA ACATGAGTGT GTTGGACCCT 2520 GGAGTGCAGC TCGAAAACAC AAAGCCAGTT GAGTCTGTTA AGCTAGCTTC AGAGGCTCCA 2580 CTACAGCAGT TTAGACTCTA ATTACATTTA CTGTTTGTTT AAAAGACTTC TGGACAGACT 2640 GGAGACCTCA TGGTGTATTT GTCATCTTAA GGTTGTCATA AAGGACCCAC AGTCTTTGCA 2700 CTTTCCCTCT CCTCCGTCAA CAGCAAGTCA GCAACTTGTC CTCAGTCTGG TCTTCACATC 2760 ACAGATGGCT GCCACAGCTC ACGCATCACC TCTTCACACA ACAATGTCCA AAGCAGGCAG 2820 AGAAGGAAAG GGGCAAATAG GTTTCTCTTT ATGTGCCTCT TTCTTGTCAT AGAGTAAACT 2880 CTTTCCCAGA AGCCCCCAGA TTAGTTTCCC TTTGGACAAA ACTGGGTCAC GTGACCACCT 2940 CTGAGCCAAT CGCAGGTCCA GGAGAACAGG GTGGCTATGA CTGGGTAAAG CAAATGCAGT 3000 TTTTCCCCTA GGACTAGGCA CATGGCCAGC TGCAGAAAGT CAGGGTTTTC TCAGCAGGAA 3060 AGGAGAGGGG AATGGCAGTT GACAAGGCAA CCCGCAGTGT CTGATACCCC AGCATTTAAA 3120 AATGTTTAGC ACAGACACCC ACGTTGATTT GCAATATGAT TGTAGGTGGT ACATGAAGTT 3180 GTGGTTGCGT GTTTTTAAAT AATTTTAGTA TTTATTAAGT ATTTAAATGC ATTTGAAAAA 3240 AACATATAGG CCAGGTGTGG TGGCTCACAC CTGTAATTCT AGCACTTTGG GAGACCAAGA 3300 CTGGCGGATC ACTTGAGGTC AGGAGTTCGA GACCAGCCCG GCCAACATGA TGAAAACCCA 3360 TCTCTACTAA AAATACAAAA ATTAGCCAGG CGTGGTGGTG GTGTCTGTAG TTCCAGCTAC 3420 TCAGGAGGTT GAGGCAGGAG AATCACTTGA ACCTGTGAGG TGGGGGTGGA ATGAGTCCAG 3480 ATCGTGCTAC TGCACTCCAG CCTGGGTGAC AAAGCGAGAC TCTGTCTCAG GAAAAAAAAA 3540 GAACCAAAAC CATATATATG GCTATCTCAT 3570
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