Tag | Content |
---|
EnhancerAtlas ID | HS105-50070 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr20:37516730-37517880 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF4G | MA0484.1 | chr20:37516831-37516846 | TGGACTTTGGCTTCT | - | 6.04 |
|
| Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
SE_03250 | chr20:37514729-37520059 | Brain_Angular_Gyrus | SE_03909 | chr20:37514532-37523661 | Brain_Anterior_Caudate | SE_04848 | chr20:37506410-37524909 | Brain_Cingulate_Gyrus | SE_06033 | chr20:37507143-37524900 | Brain_Hippocampus_Middle | SE_06890 | chr20:37508139-37524728 | Brain_Hippocampus_Middle_150 | SE_07766 | chr20:37506332-37524289 | Brain_Inferior_Temporal_Lobe | SE_08935 | chr20:37516632-37516929 | Brain_Mid_Frontal_Lobe | SE_08935 | chr20:37517017-37517514 | Brain_Mid_Frontal_Lobe | SE_10866 | chr20:37514434-37524112 | CD20 | SE_18452 | chr20:37516198-37517038 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19339 | chr20:37516900-37517796 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_58367 | chr20:37432586-37523471 | Ly1 | SE_58897 | chr20:37486576-37523423 | Ly3 | SE_59808 | chr20:37486472-37523158 | Ly4 | SE_60456 | chr20:37465257-37523774 | DHL6 | SE_62082 | chr20:37486809-37523859 | Toledo | SE_62303 | chr20:37455806-37523555 | Tonsil |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I038887 | chr20 | 37516199 | 37519964 |
|
Enhancer Sequence | TGTTTCCCCA CAGCAGAAAT CAACGAGGAA ACCACCTCAG CCCTGCCCTA TGGCATGAAC 60 CGTAGCGTGG AGATAGTGTC CACGGTGGGG ATTAGGGGAT GTGGACTTTG GCTTCTGTTT 120 CACAGGGAGC TAGACTTGGC TGGGGGTGGG AGGAGGCTCA GAGGGCTCAG GGCCAGCCTA 180 TGTATCCTGT CTGCAGTGCC TGGGCCTGCA CGCCTGGCTT CATCAGCACG ATGGCACGAG 240 GGCCACCCAC ACAAGCCAGC TTGTGTATTC AAGTTCGTCC ACTTGCCCCA CAAACAGCCA 300 CCCTCTGTTC ACCACTCTGG CCTAGAGGTC CGCTTGCCCA GTAACTGCAC AGTCTACCTT 360 TGGGAAGCTG GATCCAGGGA AGATCCTATT GAGGCCCTGC AAGCAGGCTC GGAGTCATTT 420 GGACAGGGAC AGTAGAGGTG TGGCCTGGAA GGGGAGCCAG GGGCTTGGGT GGACTCGTCC 480 CACTGGCCCC CTGGACTCCT CATCCACGGG GAGAGGCAAA GCTGGAGGGC CTGAGATCAC 540 CCTGCCAAAG CCAGAGCTGG GGTCCCAGTT GCCAAGCCTG GGAAGGGGCC TGCAGGGCTG 600 GTGGGTGAGC TCCTCTCTTC TCTCCCTTTG CACGTGGGTT CAGGGGAGAA TTGGGGCTTG 660 AATGGTGGTG GGCAGAGGAG GAGGGAGGAG GGTCACAGTG ATAAGGGGAG GGGGCTTATC 720 CTAAGCAAGA GGGATTCCAG GCTGTCAATG CTGTTCACTC TGGCCTCCCT GCCCACCCAG 780 AATCCCTGAA CACACACACA CACACACACA CACACACACA CACACACACA CACACACACA 840 CCCCTAGACA AAATTCTAGG GATTGGGGAT GGTTAAAACC TCTGCTACCC TCCTTCCCCA 900 GGGCTCAGTA GGGCCAAAGA AGGGGCATTT GACACCCATA GGTGAGCCAT CACCTGCTGT 960 GGGGACCCAC AGTTTTAGTA AAAATCATCA CATCTGCCAG AGCAGGAGTT CACCTTCAAA 1020 CCACATGCTG GCCACTGTGC TGAGCCCCTG GCATGGCTCA CCTCGATGAC CACTCACACT 1080 GCTACTGTGA GGAGGATGAA CATCATCCCC ATTTTGCAGA TGAGAAAACT GAGGCACAGA 1140 GAAGGAAGTG 1150
|