Tag | Content |
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EnhancerAtlas ID | HS105-49935 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr20:35442550-35443490 |
Target genes | Number: 11 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
PPARG | MA0066.1 | chr20:35442550-35442570 | TTGGGTGACTCTGCCCCACT | + | 6.04 | SOX10 | MA0442.2 | chr20:35443478-35443489 | AAAACAAAGGA | + | 6.32 | Sox3 | MA0514.1 | chr20:35443478-35443488 | AAAACAAAGG | - | 6.02 |
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| Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
SE_05912 | chr20:35440104-35443098 | Brain_Hippocampus_Middle | SE_05912 | chr20:35443392-35445293 | Brain_Hippocampus_Middle | SE_26860 | chr20:35440798-35442650 | Esophagus | SE_31934 | chr20:35441772-35442684 | Gastric |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I036814 | chr20 | 35443393 | 35445293 |
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Enhancer Sequence | TTGGGTGACT CTGCCCCACT AGATGATAAG GACCATGAGA GGGGGAATCA TATCTGTTTT 60 TGCTAATCAT GACATCTTCA GCAGTGAGCA CAAAAACTGT GTGAACAACA GACAAGGCAT 120 CATAAATTAA CAAACTGATA CATTGCGTTA AAAATATAAG TTGTGTAGTA ACAATAGATA 180 TAAAGCAATC TGGGTGGAAA AACAAATATA TGATAGATGT GTAGAGAAGG ATTTAGAAGG 240 ACAAGCTGCA AGGATGAAAT ATTCTAGATC CACTCTACTA GACACACACA AATACTGAAC 300 ATTTAAAATG TGACTATTAG GCCACACACA GTGGCTCACA CCTATAGTCC TAGCACTTTG 360 GGAGGCTGAG GCTGGTGGAT CACTTAAGCT CAGGAGTTCA AGACCAGCCT GGGCAATATG 420 GCAAGATTCC ATCTCTACAA AAAAATTTAA AAATTATGGC CAGGCACAGT GGCTCACACC 480 TGTAATCCCA GAACTTTGGG AGACAAAGGC GGTCGGATCA CTTGAAGTCA GGAGTTCGAG 540 ACCAGCCTGG CCAACATGGT GAAACCCCAT CTCTACTAAA AATACAAAAA TTAGCCAGGC 600 ATGATGGAGG GCGCCTGTAA TCCTGGCTAC TTGGGAGGCT AAGAGAGGAG AATCGCTTGA 660 ACCTGGGAGT TGGAGGTTAC AGTGAGCCGA GATTGCGCCA CTGCATTCCA GCCTGGGTGA 720 CAGAGCGAGA CTCCGTCTCA AAAAAAATAA AAAATAAATA AAAATTAGCT GGGTGTGGTG 780 GTGCTCACTT GTAGTCCCAG GTACTCAGGA GAGTGAGGGG GGGAGAATGG CTAGAGCCCA 840 GGATATCGAG GCTGCAGTGA ACTGAGATTG CACCACTGCA CTTCAGCCTG GCCAGCGGGG 900 AGAGACCCTA TCTCAAGAAA AACAAAACAA AACAAAGGAA 940
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