Tag | Content |
---|
EnhancerAtlas ID | HS105-49003 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr20:3795460-3796170 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Foxd3 | MA0041.1 | chr20:3795983-3795995 | GTTTGTTTGTTT | + | 6.32 | Foxd3 | MA0041.1 | chr20:3795987-3795999 | GTTTGTTTGTTT | + | 6.32 | Foxd3 | MA0041.1 | chr20:3795991-3796003 | GTTTGTTTGTTT | + | 6.32 | SCRT1 | MA0743.1 | chr20:3795947-3795962 | AGCCACCTGTTGCCT | - | 6.66 |
|
| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_15076 | chr20:3796024-3797766 | CD4_Memory_Primary_7pool | SE_18028 | chr20:3796004-3798018 | CD4p_CD25-_CD45ROp_Memory | SE_19741 | chr20:3795372-3796293 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_24365 | chr20:3795655-3795973 | Colon_Crypt_2 | SE_34329 | chr20:3795321-3795986 | HCT-116 | SE_62046 | chr20:3775652-3802346 | Toledo | SE_68288 | chr20:3765792-3802280 | TC32 | SE_68289 | chr20:3765792-3802280 | TC32 | SE_68290 | chr20:3765792-3802280 | TC32 | SE_68291 | chr20:3765792-3802280 | TC32 | SE_68292 | chr20:3765792-3802280 | TC32 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I003815 | chr20 | 3795649 | 3797643 |
|
Enhancer Sequence | CCCAAAGAGC TGGGATTACA GGCGTGAGCC ACCGCGCCCG GCAAAATTTT TTTAAAACTA 60 GCCAGGTGTT GTGGGGTGCA ACTGTAGTCC CAGCTATTCA GGAGACTGAG GCAGGAATAT 120 TGCTTGAGTC CAGGAAGTTG AGGTTGCAGT GAGCCGGGAC TGCGCCATTG CACTCCAGCC 180 TAGGGGTCAG AAAGAGACCC TGCCTCAAAA AACAAACAAA AAGGCAAGCC AGGCTGCCTC 240 TATTGTGGGG GCAGGCCCCA CCCTATGTGA ATAGAAAGTG GAAGGCAGGC GGGTGGGAAG 300 GTGGGAAAGG GGCCAATGTG AGGAGGCAGG GAGTGGCTGT GGGCAACCCC CCAACTTGGA 360 GGACCACTGA GAAAAGCAGG GTTGGGGGGT GTGGCGATGG GCGCCTCTGC CCACAGTCAG 420 AGGGAGGGTA AGGGAAAGAA CGAGGGAGAC GTGGCCCCTC TAGGTAGGTG GGCTGGGTCA 480 CAAATCCAGC CACCTGTTGC CTTCAAGCTC CTCTAGGTTT TTTGTTTGTT TGTTTGTTTG 540 TTTTTTTGGT AGTGCTTTAT CTTTCTTCCT TTTCATTTTC TCTGGCACAC ACAAACACAC 600 AATCCCACAT CTGCAGCCAC TGGGTGCCCA GCTCTGCCAC AAGCCCTGGG CTAACTCCTG 660 TAAAAGCCTC ACACATGGCT GGGCACAGTG GCTCATGCCT GTAATCCCAG 710
|