Tag | Content |
---|
EnhancerAtlas ID | HS105-48912 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr20:1821520-1822880 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EBF1 | MA0154.3 | chr20:1822720-1822734 | ATTCCCATGGGACC | + | 6.73 | EWSR1-FLI1 | MA0149.1 | chr20:1821698-1821716 | GGAAGGAAGGGAAGGAGG | + | 6.71 | EWSR1-FLI1 | MA0149.1 | chr20:1821702-1821720 | GGAAGGGAAGGAGGAAGG | + | 7.05 | IRF1 | MA0050.2 | chr20:1822510-1822531 | AGGATGAAAGTGAAAGTGCCC | - | 6.64 | TFAP2A | MA0003.3 | chr20:1822102-1822113 | AGCCTCAGGCA | + | 6.32 | ZNF263 | MA0528.1 | chr20:1821791-1821812 | GCCCCTTCTCCATCCTGCTCC | - | 6.21 | ZNF263 | MA0528.1 | chr20:1821794-1821815 | CCTTCTCCATCCTGCTCCCCC | - | 6.31 | ZNF263 | MA0528.1 | chr20:1821696-1821717 | AGGGAAGGAAGGGAAGGAGGA | + | 6.73 | ZNF263 | MA0528.1 | chr20:1821699-1821720 | GAAGGAAGGGAAGGAGGAAGG | + | 7.57 |
|
| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_04057 | chr20:1821369-1822925 | Brain_Anterior_Caudate | SE_05054 | chr20:1820542-1823003 | Brain_Cingulate_Gyrus | SE_06036 | chr20:1818835-1822807 | Brain_Hippocampus_Middle | SE_06926 | chr20:1820515-1824066 | Brain_Hippocampus_Middle_150 | SE_07894 | chr20:1820865-1823325 | Brain_Inferior_Temporal_Lobe | SE_08826 | chr20:1821803-1822088 | Brain_Mid_Frontal_Lobe | SE_09273 | chr20:1818880-1823421 | CD14 | SE_37018 | chr20:1819239-1823127 | HSMMtube | SE_51714 | chr20:1821407-1822879 | Skeletal_Muscle_Myoblast | SE_54036 | chr20:1820661-1822025 | Spleen | SE_63500 | chr20:1821407-1822916 | HSMM |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I001839 | chr20 | 1819847 | 1822819 |
|
Enhancer Sequence | CATTTTAGTG AAGATGTAAA GGAGGCATGA GATAGAATCT GGGACAGAGA GTTCCAGGCA 60 GAGGAAACAG TGAGTGCAAA GGCCCGGAGG CAGGCCCACT CCTGGTTTGT TTGAAGAAAG 120 CAAGGAGGTC CCTGTGGCTG AGCTGACTAA GCTGGTGGGG GCGGGACAGA TCATGCAGGG 180 AAGGAAGGGA AGGAGGAAGG GGCTGAATGG GCAGAAGAGA CTGGGACCTG GATGCCTATA 240 GGAGGGAGGG AAACCAGCGA GACAGGGCCT GGCCCCTTCT CCATCCTGCT CCCCCGACCC 300 AAGGAAGCAG CATCTCCCAT TCCTCCTTTC ATCCCACAAA GCTTCATCAG CCAAAAAGTG 360 AAAGTTTAAA AAGGGAGGAA CTGATCCCAG GAGAGGCAGG GCCCTGAGAT TTGCCTGAAC 420 CCAGGTCAGA CCCCAGCCCG GGTGGGGTGT GACTTCCTGT GGCTCTGATG GAATTCTCAC 480 TGTCCTCCTC AGGATGCATT CCTGGGCCTG AGGCACAGAA AGAGGACACA CAGCCAATAG 540 CAGCCAGTTT CAGGGCTCCT AAGCCTGCTG GGAGACACCC CCAGCCTCAG GCAGTGCTGT 600 CGGGGTGGGC TACCTAAGCT GCAGGTGAGA AGAATGGTGG CTAATTAGGG TGCTGCCTCC 660 TTCTCACTCT CCAGGTCCCA GGGATACCCT GAGTTGGATT TCAGGCTCAT TAATGTCTTG 720 GCAGAGAGGC TCTGGCTGTG AGCTCTCTCC AGCTGCCCAG CCTTGCCTGG CAGGAGTAGG 780 GAATAGAAGG GAGACTCACA GGGGAGTCAT CTACCCCCAG AGTCAGTCCC AAGGCAGGCC 840 CAGGGTTGAA GGACGTCCTA GAGGACGTCC TAGAGCCCAG TGACATTGGC TGAGACACTC 900 TCCCTCCCTG AGCCCCTTTG TCCCTGTCTC TCCAAGGGGA TCATAGGCCT TTTCCCACCT 960 GACTTCCAGA GCTGGGATGA ACCCAAATAA AGGATGAAAG TGAAAGTGCC CTGAATCATT 1020 AAAGAGACAG GCAGAACTCC CTGTGCCACC CTGGAGGGAT CTGCAGGATG GGTTGTTACG 1080 TAAGACAAGG CGCCTTGCAA CAACTGCTGC CTGGCTGGCC TCCCAGCTTC TGCCCTTCCG 1140 TGGTGGCTGT TCTCCCCTGG TAGCCCCTGG ATTCTGTTAC ATAAAATACC AGGTCAAAGA 1200 ATTCCCATGG GACCCAGCAA TTCCACATCT GGCTCTATAC CCAAAAGAAC TGAAAGCAGC 1260 GTCTCAAATA AGTATCCGCA CACCCATCTT CATAGCAGCA TCATTCACAA TAGCCGAAAG 1320 GAGGACGCAA CCCAAGTGTC CACTGGCAGA TGAATAAATG 1360
|