Tag | Content |
---|
EnhancerAtlas ID | HS105-48906 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr20:1801200-1801870 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Mafb | MA0117.2 | chr20:1801489-1801501 | AAAATGCTGACA | + | 6.62 | SP4 | MA0685.1 | chr20:1801383-1801400 | AGAGGGGGAGTGGCCAG | - | 6.04 | TCF7L2 | MA0523.1 | chr20:1801732-1801746 | GAACTTCAAAGGAA | + | 6.53 |
|
| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_03309 | chr20:1800165-1801657 | Brain_Angular_Gyrus | SE_04057 | chr20:1793979-1802256 | Brain_Anterior_Caudate | SE_05054 | chr20:1793923-1802856 | Brain_Cingulate_Gyrus | SE_06036 | chr20:1788184-1802826 | Brain_Hippocampus_Middle | SE_06926 | chr20:1795420-1801938 | Brain_Hippocampus_Middle_150 | SE_07894 | chr20:1793920-1802735 | Brain_Inferior_Temporal_Lobe | SE_08826 | chr20:1800617-1801322 | Brain_Mid_Frontal_Lobe | SE_09273 | chr20:1796928-1807264 | CD14 | SE_36482 | chr20:1800687-1802203 | HMEC | SE_37018 | chr20:1787850-1812476 | HSMMtube | SE_51714 | chr20:1800185-1807527 | Skeletal_Muscle_Myoblast | SE_54036 | chr20:1798434-1803196 | Spleen | SE_63500 | chr20:1795712-1812935 | HSMM |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I001815 | chr20 | 1795825 | 1807373 |
|
Enhancer Sequence | GATAATACTT ACTCTTATCA CAGTAAATAG CAATGTCATT GCAAAAATCA GTTATTGAGT 60 ACTCACTGTG AGCCAGGTAC CTTGCTAAGT GCTCTTCATG TGTTATCTCA CACAGTTCAC 120 AATAACCAGT GTGGTGAGGA CTATCATCGC CCCAGTGGTA CTGATGAGGA AACTGAGGCT 180 CAGAGAGGGG GAGTGGCCAG CACAGCATCA CTCTGTGAGC CAGAAAGCTC AGGACTCTGG 240 CCAGGCCAGC CCAACTCTGG AATCCTTGAG TTTAACCTCA AACGCACTGA AAATGCTGAC 300 ACTTGAGTAT TAGCAGGAAC TGGGTGATGC AGTCCCTGAC TCACCTCCCA TAAAGGAGGA 360 CCATGTGCTG TGAGGCCATG GCCACAGCCC TTCCTTGGGC CCAGCTTCCC CATCTTCTCA 420 ATGGTCCAGT TCCTGTTTGA AAAACCTTTC AGAGGCTGGT TCTGTAAACC CTGGAGACAC 480 AGTTTGTCTT CCTTTCCCTG GGGAAAGGCT CATCTGGGAG AGGTAGAGCT TAGAACTTCA 540 AAGGAAGCCA CAGGGGCAAA AATATCCCTC CTGCCTCTTG TCCCAACACC ATTCTTGGTT 600 TGACTTGGCC AAGAATGTTC CCTGGTCCAC CTCTGAAAGT CTGCAGGGAT GCTTCCAGCT 660 GTTCCCACTA 670
|