| Tag | Content |
|---|
EnhancerAtlas ID | HS105-48837 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr20:343730-344510 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EGR1 | MA0162.3 | chr20:344309-344323 | GACGCCCACGCAAA | + | 6.73 | | EGR2 | MA0472.2 | chr20:344310-344321 | ACGCCCACGCA | + | 6.62 | | EGR3 | MA0732.1 | chr20:344308-344323 | TGACGCCCACGCAAA | + | 6.39 | | EGR4 | MA0733.1 | chr20:344308-344324 | TGACGCCCACGCAAAA | + | 6.51 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_15234 | chr20:343643-347565 | CD4_Memory_Primary_7pool | | SE_34190 | chr20:343766-344615 | HCC1954 | | SE_35196 | chr20:342413-347726 | HeLa | | SE_39865 | chr20:342716-344830 | K562 | | SE_56861 | chr20:343642-344821 | VACO_400 | | SE_64879 | chr20:342738-347745 | NHEK |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I000360 | chr20 | 340667 | 348480 |
|
Enhancer Sequence | GCTGGGACTA CAGGCGCATG CCGCCACATC CCGCTAATTT TTGTATTTTC TGTAGAGATG 60
GGGTTTCGCT ATGTCGGCCA GGCTGGTCTC AAACTCCTGG GCTCAAGCGA TCTGCCTGCC 120
TCAGCCTCTG CAGTGCTGAG ATTACAGGTG TGAGCCACCG TGCTGAGCTG TGAATTTATT 180
TTTTACACAA ATCTGAGTGC TCACTCTGTG CTGGCCCTGG ACGGGTCTCT GTGGATGTCT 240
GGTGAGCAGG ATGGACACAG CCCGGTCATT GCAACGCTAA AAGCTTGAAT GACACCAGTC 300
AGGCTGGGGA ACTGGGAGGG CCCTTGACAT GCAGAGTGAC TCAGCCAGTG TGAGCAGGGG 360
TTGTCAGCAT GCCTAGGGGA GCAAGAGACT GTGAGAGATG TGTGTGTATA CTTGTGTGCC 420
TGTGTGTGTC CGTGTGTACA CATGTGTGCG CCGACACAGC CAGGTGTTGG CCAATGCAGG 480
TGTGGTGTCC TCAAGAGCAC AGTGCATCCT GATTCTTCAC CCTCCCAGGC CTCCCCTGCC 540
CCTGTTGTGT GCCAGCTGGG CCTGCCCCAT GTTATGCCTG ACGCCCACGC AAAAGCTGCT 600
TCTTCCAGTC ACAGGACAAA GGCATCCTCA GCCCAGACCC TGTACCCCAG GGGTAAAGAC 660
CTCTCAGACC CCTAGTGCTC CTCAGCATGG ACCTCTCCAC CAGGAGCCTC AGAGTTGTGA 720
GAAGCACAGG CACCCAAAGC CCACCGCCCT GTGTCCATGT GCATGGAGTG TGCCCAGGTA 780
|
