EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-48595

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr2:238449600-238450280

Target genes

Number: 9
Name	Ensembl ID

COPS8	ENSG00000198612
AC112715.2	ENSG00000224132
COL6A3	ENSG00000163359
AC112721.1	ENSG00000222022
AC112721.2	ENSG00000222032
MLPH	ENSG00000115648
AC104667.3	ENSG00000234949
RAB17	ENSG00000124839
LRRFIP1	ENSG00000124831

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr2:238450029-238450044	AAAGGTCAAAGGGCA	+	6.03
NR2C2	MA0504.1	chr2:238450029-238450044	AAAGGTCAAAGGGCA	+	6.83
NR2F1	MA0017.2	chr2:238450028-238450041	CAAAGGTCAAAGG	+	7.22
Nr2f6	MA0677.1	chr2:238450030-238450044	AAGGTCAAAGGGCA	+	6.62
Rxra	MA0512.2	chr2:238450030-238450044	AAGGTCAAAGGGCA	+	6.28

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_31456

chr2:238448140-238450798

Gastric

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH02I237539

chr2

238448426

238450638

Enhancer Sequence

GTAGCCCAGA AGGCACAGGG GAGCACTGAG TTCCACAAAC ACAGATGGTG ACCACACCCA 60
GGCCTTGAAC ATCTGCCAGC TCTAACATCC GCCAGCTCAC ACTGAGCCCT CCCCATTGGC 120
CCAGCATGCA CGGCTCTGAA GGCCAGGCAT GAACCTGGGG GTTTCTGGGG GACTCACCTA 180
ATTCGCCACC CCCTGAGCCC TCCACCCCTT CCCTTTTTCC TGTTCAACTT GGTGAGGGAC 240
AGGCAGGGTT TCCACCAAGA AAAAGGTGCT GAACACACAA TCCCTGACCC AGGATGGGGG 300
CCTAGAAGCA GGCCTGGAAT TTAGGACAGC CCCAGACCTC AGCACTGGAC TCTGTCCGGA 360
GGGCCATCTG TGAGTCTGAG TTGTGGCTGC AGAGCTTGAA TCTGGGTGAG GAACCCATCA 420
ATAGTGCACA AAGGTCAAAG GGCAGAGCCA AAGCATTCAG GCCTCCCAGG GACAGCTGAG 480
GTGACTTAGG CACTGCTCTG TCCTCCCTGG AGACCTACAG AGAGGAGAGG GGGTGCCTCT 540
CGGACTGTGA GGACAGCCAG CCCCCACGGC CCTCCTCCAC TTCCCTTCTC ATCAGCAGGT 600
GCCTGTCACT CCCTAAGGAC AAAGGGCACG TCCCCTAGAG CTGTTCAAGG GGAGCGAGTC 660
AGGCTCTGGA CTTTCCCTTC 680