EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-48566

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr2:238257020-238257250

Target genes

Number: 10
Name	Ensembl ID

AC112715.2	ENSG00000224132
COL6A3	ENSG00000163359
AC112721.1	ENSG00000222022
AC112721.2	ENSG00000222032
MLPH	ENSG00000115648
AC104667.3	ENSG00000234949
RAB17	ENSG00000124839
AC096574.5	ENSG00000227107
LRRFIP1	ENSG00000124831
RAMP1	ENSG00000132329

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESRRB	MA0141.3	chr2:238257086-238257097	ATTGACCTTGA	-	6.02
Esrra	MA0592.2	chr2:238257087-238257098	TTGACCTTGAA	-	6.14
MAFF	MA0495.3	chr2:238257110-238257125	CTGCTGAGTCATCAA	+	6.35
MAFF	MA0495.3	chr2:238257110-238257125	CTGCTGAGTCATCAA	-	6.36
MAFK	MA0496.2	chr2:238257108-238257127	GTCTGCTGAGTCATCAAAC	-	6.31
MAFK	MA0496.2	chr2:238257108-238257127	GTCTGCTGAGTCATCAAAC	+	6.69
NFE2L1	MA0089.2	chr2:238257109-238257124	TCTGCTGAGTCATCA	-	6.93

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_45533	chr2:238252113-238258407	Osteoblasts
SE_54504	chr2:238253775-238262863	Stomach_Smooth_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH02I237347

chr2

238255999

238257899

Enhancer Sequence

TTTCTCCCTA TAAAGGAAAA ATAGATTATT TAATACTTGG TTCTAATTTA AATTCATCTA 60
AAATAAATTG ACCTTGAAAG AAAGAAATGT CTGCTGAGTC ATCAAACGAA AACACTCACT 120
CAAATACAAA GACAATTTTT AAAGAAATAA TTCTTTTAAA ACACAACACA TCAGAAGTTG 180
TCCTTGGAGC CTCCTGGCAG CAAGGACGCT TGGATAATCC TCAGCAGATA 230