EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-47749

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr2:219922420-219923400

Target genes

Number: 19
Name	Ensembl ID

RQCD1	ENSG00000144580
IHH	ENSG00000163501
NHEJ1	ENSG00000187736
FAM134A	ENSG00000144567
CNPPD1	ENSG00000115649
ZFAND2B	ENSG00000158552
ABCB6	ENSG00000115657
ATG9A	ENSG00000198925
ANKZF1	ENSG00000163516
STK16	ENSG00000115661
GLB1L	ENSG00000163521
TUBA4B	ENSG00000243910
TUBA4A	ENSG00000127824
AC114803.3	ENSG00000230432
PTPRN	ENSG00000054356
SPEG	ENSG00000072195
GMPPA	ENSG00000144591
CHPF	ENSG00000123989
OBSL1	ENSG00000124006

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5

MA0599.1

chr2:219923216-219923226

GCCCCGCCCC

6.02

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_23646	chr2:219921771-219926449	Colon_Crypt_1
SE_24654	chr2:219923154-219926304	Colon_Crypt_2
SE_25299	chr2:219921472-219926421	Colon_Crypt_3
SE_27657	chr2:219922726-219926611	Fetal_Intestine
SE_29068	chr2:219922636-219925481	Fetal_Intestine_Large

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH02I219058	chr2	219922821	219922970
GH02I219059	chr2	219922997	219926270

Enhancer Sequence

GAGAGGAATG TGCGCGAAAT CAACCAGAGC GAAATCAGCC GGAGGAGCCG GCCGAGGTGC 60
AGGTGTAGGC GCAGCCTCGC CCAGAACTCT CCCGCCACAC CCAAGGGAGC TGGAAGCCCG 120
GGAGGGTGCT GTCCCTCTCC CTTAGGAACA GAGGGCCCTG AAGTGCTCCC TCCCTAGCAT 180
ACAGCCGCCC CCGGGGATCT GGACCGCACG GCGGTATCAC AAATCTGGAG GAGGCATGGA 240
GGCAAGCGCC CTGGCGGCGC CTTCACTGGT AGGTGGAGGT CCCCTCTCTC CTGTGCTGTC 300
TTCAGCTCCG GGTATCCATC CCTCCACAGA CAGGACTACA CCTTTCAGCG CCCGGTCCCT 360
CTGTGCCTCC AAGGCAGGAG GGCCAGCCAG CGGCCGGGAG GGAGGAGTGG CAGCAGAGCC 420
GACTGCCTGC GGCCGGCCTG CGAGGCGTGC AAGGCCCGAG GTGCCCAGTA GGTGTCACCG 480
CAGCCTCAGG GCTGAGGCCT GGGGACGACA GGCTCTGGAG GCGCGGCAGG TGCAGAGCGT 540
CTCGGTAGCT TCAGGGGGTG TGTTGGAGGG GAATCGCCGG CCTGCCTGGA TCCCTCGAGC 600
ACCACCGAGG ATTCCCGCCG GGACCCTCTT ATAATCTTAA ACCGGCCCAC AACCCCGCCA 660
GAGATGACAG GGCCAGGGAA CCAGAAACCG GCGGATTAGC GCCAGGGCCG CCCAATGGGG 720
GGCCACATGC AACGTCTTCC TCTGCAAGGC GCAAAAGGGG CTGACAATCC CAGACCTCCA 780
GGACCTCTGC ACCGGTGCCC CGCCCCTATA CCGTAGGAAG GAACTCCATA AACCAAGCTT 840
CTGATCTCAG GGAGCCAGCT CCACCATCCT CCTCACGTGG AGTTGGGGTA GAGCCGCGCC 900
CTGGGGGAAG GACCGAAGCG GTCATCCTTG GTTGCTGCCT CCTGGTGTGC CTGGGTCCTG 960
AGAGCCCAAG AGACTGTGCA 980