EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-47722

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr2:219452420-219454430

Target genes

Number: 19
Name	Ensembl ID

TNS1	ENSG00000079308
ARPC2	ENSG00000163466
RP11	ENSG00000261338
GPBAR1	ENSG00000179921
AAMP	ENSG00000127837
PNKD	ENSG00000127838
TMBIM1	ENSG00000135926
AC021016.7	ENSG00000230580
CTDSP1	ENSG00000144579
VIL1	ENSG00000127831
USP37	ENSG00000135913
RQCD1	ENSG00000144580
PLCD4	ENSG00000115556
BCS1L	ENSG00000074582
ZNF142	ENSG00000115568
STK36	ENSG00000163482
RNF25	ENSG00000163481
TTLL4	ENSG00000135912
CYP27A1	ENSG00000135929

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

LMX1B	MA0703.2	chr2:219454057-219454068	TTAATTAAATT	-	6.32
Nr2f6(var.2)	MA0728.1	chr2:219453516-219453531	TGAACTCCTGACCTC	-	6.22
PHOX2A	MA0713.1	chr2:219454058-219454069	TAATTAAATTA	-	6.62
PROP1	MA0715.1	chr2:219454058-219454069	TAATTAAATTA	+	6.32
PROP1	MA0715.1	chr2:219454058-219454069	TAATTAAATTA	-	6.62
Phox2b	MA0681.1	chr2:219454058-219454069	TAATTAAATTA	-	6.62

Enhancer Sequence

ATGTACTTTT AACTTAGATT TTACATTGTG TTGACTCTTA AGCTGCTTCC TTATGGTCCT 60
GGGATCATTT TCTCTCTTCA AGCTTTTGAA ATTTGTATGA ATATTTTCTG TTTTGAATAA 120
AAATTATTAT GAAACAATTA TTGAAAAACC CAAACCATTC AGAAGAAAAT CAAGTTAAAC 180
ACTAAATTTC TTTTCTCCAA ACCCACATCT CACTCCACAG GTAAATTCTA AGTATATTAT 240
TACGGTTTCA TTTTTTTAAT TTTAAAATTT CAATCCTGCT CCTTCTATAA CCGGGCTTTT 300
TTAAAATACA TAATCAATTA TATGTACTTG AGCTTCTGCT TACTATGTAC TTTAACCATG 360
AATGACAACA TGACAAGGTA CAGAATTCTT ACTCATTGTA CAGAATTCTT ACCTCATTGT 420
TCTGTCTCAG ACCTCCATTG CCATAGTCCT TTTGTCTTCT AACATTGAAT ATTGCAGAGA 480
AGTCTCAGGG TCAGCCTAAT TCTTTCCTTT TTTAGGTGAA CTTACTTTTT TGTGTGGTTA 540
CCTACAAGTG TCTTTTATTA TTTTTAAAGT TCATTTGATA ATCATATATC TTTTTTTTTT 600
TTTTTCTCTG AGATGGAGTC TTGCTGTGTC ACCCAGGCTG GAGTGCAGTG GTGTAATCTC 660
AGCTCATTGC AACCTCCGCC TCCCGGGTTC AAGCAGTTCT CCTGCCTCAG CCTCCCAAGT 720
AGCTGGGACT ACAGGCATGT GCCACCATAC CCAGCTAATA TTTGTATTTT TAGTAGAAAT 780
GGGGTTTCAC TATATTAACC AGGCTGGTGT TGAACCCCTG ACCTCAGGTG ATCCGTCCGC 840
CTCAGCCTCC CAAAGTGCTG GGTTTACAGT CATGAGCCAC TCCACCCGGC CTTTTTTTTT 900
TTTTTTTTTT TTTTTTTGAG ATGGAGTGAT GTAATCTCAG CTCGCTGCAA CCTCCACCTA 960
TCAGGTTCAA GCAATTCTTC TGCCTCAGCC TCCCACGTAG CTGGGACTAC AGGCACACAC 1020
CACCACTCCT GGCTAATTTT TTTTTTTTTG TATTTTTAGT AGAGATTGGG TTTTGTCATG 1080
TTGGACAGGC TGGTCTTGAA CTCCTGACCT CAGATGATCC GCCCACCTTG GCCTCCCAAA 1140
GTGCTGGGAT TACAGGCGTG AGCCACCTCA CCCAGCCTCA ATTTTTTTCT GAAAGAGCAT 1200
ATTACTTGTG TCTTTTTTGT TGATTTGTAT ATTTTTCTCT TTTATTCGTT CAAGTCTCTT 1260
GGTTCAACAT CAGTTATGCT CTATTATCTG TCTTTCATAT TTTTTTCTCT AATCACTTTC 1320
AATTTTTAAA TTTCATATTA TTTGATTTTT TTCAAGGTTA CTTTTCCATA CTGCTGACAA 1380
TTTTGGGTAG TATTCAACCT CTGCTCTAAA ATTTGCCTTG TCACATTAAA TTACTTTTTT 1440
AGTCTAACAA ATATTTTATT CTTGAGTTGG GTGTAAGCAG GTATAATGAT TTTTTTGGCT 1500
TTTTACTTTT AAATATATAT ATATGGAATG CTTCATGAAT TTGTGTATTA TCTTCGCACA 1560
GGGGCCACAC TAATCTTCTC TGTGTTGTTC CAATTTTAGT ACATGTGCTG TCTAAGTGAG 1620
CACTGGTTTT TTAATTTTTA ATTAAATTAT TTATTTATTT AGAGACAGGA TCTCTGTCTG 1680
TCACCCAGGC TGGAGTAGAG AGGCATGGCT CACTGCCGCC TCGACCTCCT AGGTTCAGTT 1740
GATCCTCCCA CCTCAGCTTC ACAAGTAGCT GGGACCACAT GCCTGCTCCA CCACACTCAG 1800
CTAATTATTT TTATTTTTTG TAAAGACAAG GTCTCCCTAT GTTGCCTGGG CTACTCTTGA 1860
ACTCCTGGGC TCAAAGGATC TTCCTGCCTT CTGCCGTAGT ACTAGGAGTA CAAGCATGAG 1920
CCACTGTGCC TGACCAATTT ATTGTTTTTA AAGAGACAAG GTTTCACTAT GTTGCCCAGG 1980
CTGGAATGCA GTGGCTATTC ACAGCCATGA 2010