EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-44330

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr2:85662950-85663580

Target genes

Number: 17
Name	Ensembl ID

AC011236.7	ENSG00000225787
TCF7L1	ENSG00000152284
AC093162.5	ENSG00000246575
TGOLN2	ENSG00000152291
ELMOD3	ENSG00000115459
RETSAT	ENSG00000042445
AC062037.1	ENSG00000242095
CAPG	ENSG00000042493
SH2D6	ENSG00000152292
GGCX	ENSG00000115486
VAMP8	ENSG00000118640
VAMP5	ENSG00000168899
RNF181	ENSG00000168894
USP39	ENSG00000168883
TMEM150A	ENSG00000168890
C2orf68	ENSG00000168887
SFTPB	ENSG00000168878

dbSUPER

Number of super-enhancer constituents: 22
ID	Coordinate	Tissue/cell

SE_01529	chr2:85663480-85666708	Adrenal_Gland
SE_03329	chr2:85662175-85664878	Brain_Angular_Gyrus
SE_04039	chr2:85659765-85667780	Brain_Anterior_Caudate
SE_05066	chr2:85659776-85667840	Brain_Cingulate_Gyrus
SE_05969	chr2:85659679-85668106	Brain_Hippocampus_Middle
SE_06962	chr2:85659744-85667954	Brain_Hippocampus_Middle_150
SE_08005	chr2:85659743-85667963	Brain_Inferior_Temporal_Lobe
SE_08853	chr2:85663407-85664870	Brain_Mid_Frontal_Lobe
SE_09675	chr2:85663395-85667074	CD14
SE_31856	chr2:85659842-85666966	Gastric
SE_33512	chr2:85659775-85666880	H2171
SE_34480	chr2:85662562-85664399	HCT-116
SE_34718	chr2:85659757-85667655	HeLa
SE_37700	chr2:85659671-85666984	HSMMtube
SE_42809	chr2:85659836-85666478	Lung
SE_47420	chr2:85659792-85666848	Panc1
SE_49417	chr2:85662161-85666850	Right_Atrium
SE_50604	chr2:85662226-85666450	Sigmoid_Colon
SE_52950	chr2:85662136-85663016	Small_Intestine
SE_52950	chr2:85663048-85666692	Small_Intestine
SE_65543	chr2:85662091-85667108	Pancreatic_islets
SE_69119	chr2:85663010-85665329	H9

Enhancer Sequence

GGAGCTGGAG GAGGCAGGGG CCTAAGGAGG GACCACAGAG CAGTACCCCA GGCCTAGCCA 60
AGAGCATTTG CCTAGGGAAA AATCTTCATT TTGTATCTTT CTGGGGTGGG CAGAAATGAC 120
AGAGCCCAGA GCCCTGAACT CCTTCCAGAC ACCTGGCCCT CTGGTGGGGG AGGTGCCCCT 180
CCTGCCATGG CTCAGTCTGC ACAGGGTCGA GGTGGGGCCT TTGTGCCTTT AATGAACCCA 240
GCTGGGAGGA GGGCGGGGTC CAGGATCTTC AGACTCTTGT CTACCTCCCC CAGGACTCAA 300
TGTCGCACCC AGCATTTGCT AGGATGCAAA CTAGAGACAC CCATCACACA GCTCCCCACG 360
CTGGAGGACC AGGGCAGAGG CGCACCCTAG AGTCAGTTTG ATCTAGCCTT GGACATAAGA 420
GTCTGGCCAG TGGCGTGCCC ATGGGTGCAG CAGCAGGAAA GTTGCCTGAG GCCTGGAACG 480
GGGCAGCAAA ATGGCAGTGG AGCGGCATGG GGCAAACAGG AAGGAAGATA TCTAGAAAAA 540
TGTCAAAAGT CCCCTTGCCA GAGTCCCACA GTTGCCTCAG GAAATTGCTC CCAGCATGAG 600
GCTCATGGGA CTCACGGATG CCCTGCCTCC 630