EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-43232

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr2:46826920-46828320

Target genes

Number: 15
Name	Ensembl ID

EPAS1	ENSG00000116016
AC016912.3	ENSG00000228100
RHOQ	ENSG00000119729
ATP6V1E2	ENSG00000250565
RP11	ENSG00000250116
CRIPT	ENSG00000119878
PIGF	ENSG00000151665
SOCS5	ENSG00000171150
AC016722.1	ENSG00000222005
AC016722.2	ENSG00000239332
AC016722.3	ENSG00000226548
AC016722.4	ENSG00000228925
TTC7A	ENSG00000068724
MCFD2	ENSG00000180398
CALM2	ENSG00000143933

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3	MA0135.1	chr2:46827683-46827696	GACTAATTAATTA	-	6.46
Lhx3	MA0135.1	chr2:46827686-46827699	TAATTAATTAACT	+	6.64
mix-a	MA0621.1	chr2:46827684-46827695	ACTAATTAATT	-	6.62

Enhancer Sequence

TTCAGGCCAG ATTCTTCATC TTCTGCACAC CCCTTTTCCT TCTTCTATAG TGCATTTTTA 60
GGGTTGTCAT GCCGTTTCTT TTCTCTTGCT CACACTTCAC ATGGGCACAC ATCCTATCTT 120
AACTAGCCCC AATTTTCCCT GTCTTGAAGC TGCCTTTTGA GGACTGGATG TTATTTTCTA 180
ATAAGTTTTC TGTAACATGA GGCAGGAAAG AGAATGGAGG TAGGGAGGCT GGGTAAGATA 240
AATGCTATCT CTGTGATTCA GTTAGTAATA TTCCACTGAA ATTTAATAAA TGGTGGTTCT 300
ATAATTGAGA CTTAAAAATT CATGGCCAAG GCTTACGCCT CCTCTTAGAA ATCAGATGAA 360
GCTACTATAG TGCACAGTCT GCCCCCTTAG CAGATCCCTG TAGGTAGCAG CCCTGGTAGA 420
TTGATAAGAG GTAAAGAGGC CTGATGGGGA GTCAGGGAAA CCTACACTCT ATTGGTAGGA 480
ATATGTATGG GGGTATATAC ATATTCTTCA AATTATAACT TTAGTTTGAC AGTGTCTGTT 540
AACTTCCTTT GATCTAGGAA TGTTACTCAA GTAATCTAGT CTACAAAAAC CTTTGCACAA 600
GTATACAAAA TTATATGGAA CAAAGATATA CCTAACAACA TTATTTATTA TCATGAAAAT 660
TTGATATTAA ACCTTAATAG GAAATTAGTT AAATAAATCA TGGTACATGG AATACTTGTA 720
ATGATGATTA ATTGCTCAAC ATTCATCTCA ACCCTGATGA TGAGACTAAT TAATTAACTA 780
TTGATGATCC CATTCTGTTT CTCAATGATT AGGAAAACTC AAGGAAGAGA AACTGCTGCC 840
ATCCCACTAC CAGCCTGAGG ATAATAACAA GGAGAATCAG TAAGAAGCAC AACCATACCA 900
TGACTATCTG TGTCTAGAAC CATCCAATTT CCGTTATGTG ACATAATCAG TTTCCTTATT 960
ATTCAAACCA ATATAAGCTG AAGTTTTATG TTACTTATAG AGATACAGTA GCTAAGAATA 1020
CTATGTAAGA AGAGGTAGAT TATACACACA CACAGATAAC GATGTTCATA ACACATTAGT 1080
GGGAAAAAAG TTATAAAGCC ATGACTAGTT TAACTATTTT GTTTTAAAAT TATATATATA 1140
TAATTAATAC AAAATTCGAA GAACATATAA AATCTGCTAG TTGTTCATTG CTTCCATGAT 1200
AGCATTACTA GGATCTTTAA CTTTCTATAT TTTTCTGTTT GAATTTTTAC TACAAACATT 1260
TATATACATT ATTTTGTAAT AAATAAGATA AAAAGAATAA AATAGGTAAA TTCCTTTCTA 1320
TTAACTAATT TCTAGCATCA CTGACATTGA TGTACTCTCA TTTTGTAAGT TTCCATAATA 1380
AAGCTATTTG AATTCTACGG 1400