Tag | Content |
---|
EnhancerAtlas ID | HS105-42842 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr2:39718700-39719960 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXA1 | MA0148.4 | chr2:39719021-39719037 | CACTAAGTAAACATTG | + | 6.58 | FOXC1 | MA0032.2 | chr2:39719024-39719035 | TAAGTAAACAT | + | 6.02 | Foxa2 | MA0047.2 | chr2:39719022-39719034 | ACTAAGTAAACA | - | 6.44 | POU4F2 | MA0683.1 | chr2:39719099-39719115 | CTGCATATTTAAGGAC | + | 6.02 |
|
| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_00541 | chr2:39718471-39720659 | Adipose_Nuclei | SE_37099 | chr2:39718351-39720636 | HSMMtube | SE_51909 | chr2:39718873-39720380 | Skeletal_Muscle_Myoblast | SE_55983 | chr2:39718513-39725068 | u87 | SE_63713 | chr2:39718873-39720380 | HSMM | SE_67890 | chr2:39718513-39725068 | u87 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH02I039491 | chr2 | 39718543 | 39720540 |
|
Enhancer Sequence | AAAGGAAGTT TCGTATAAAA GCTGATATAA ATGGCTAATA AAGCAGAGAA ATAGCTTAAA 60 ATTTGACTGT AGACATTTGC TATGTATGAT TAATATGTAT CAGTTTACAG TTAATTTTAG 120 GAAAACTTAA ATTTTATAAA TTGCCAAGAA ATCACCCATG AAAAACTAAT TTTCACTTAG 180 CGGTTTAATT TTTTAACATT AGGATTTTTA AGTTTCGCTA GTCTTATCAT CTGGGACACT 240 GGAATTTTGT CTTGTTGGAA TTGCTGATTA AACAAAATAA TTCTTCAAAA GTGCTTAGCA 300 CAATGTTAGG TAAATAGTAA GCACTAAGTA AACATTGGCT TTATTATTAT TAGGTGGTCC 360 TATACTATGA TTCCTCCTAT TTATATCACG TGTGTCTTGC TGCATATTTA AGGACGCTCC 420 CATCTATATG TTTGGACTAG TGCAATAGTA AAGCTGCCAG CTCAGGTGAA GAAAACCATT 480 TAAAAATTTA AAGTTAAGCA CATGATGGAA AATTCTTGAA TATGTGGTGA GTTAGGTATA 540 AAAAATATAG GGGGATTGTA TTGTTGAATA CAAAAAAGCC ATTAGACTAT TTTAAGAATG 600 CTCTCTTCTG TCATTAGGGC TTGGTTATGA ATAGTATATC ACATGCATGA AAGGAGGTGG 660 TGGCTAGTTT CATTTCCCTA AAACATGTTT CAATGGTAAA TTAGAGGCAG CTGTGGTTTA 720 CTGACGCATA AACCCAGTGA GGTCTATGAT AACTAGTATA TATTTACAGT TTGACTCATG 780 GTGCCTGTCA GGCTTTAATC ATAGGGGAAG AAGTGATAGT ACTTAGACTT CACTGTTTAA 840 TCTTCCGTTC ATTTGTTTTC CAAGTTTGTT TCAGTCTGTG GGCAGGTTCC CTTTTGATTG 900 CAACATGCAG TCCCTATTTC TGCAGTTTAT CTTCATTTGC CATTTTGAGA GGGCTATGAA 960 AGTCCTATGA TAAGCTCCTT GTTCTCCAAA TCCATGCATA TAAGTCTCAT CGAGTTGGAT 1020 GCATTCTAAA GACATTTTGA AATCACATCA ACACTTTCAG ATCAGCAAGT TATTTCTTAA 1080 TAAATTACTG TCTTAATGTT AGATGCTATT TTAAAAACAC GAAAGAGAGC AGTTTCCAAA 1140 TATGTGTTAC TACTTCCAGG GAATTGTAAA CTGGAGTGTT TAATTAAAAG AAGGCCCTAA 1200 ATTTTTATTA TGCTGTCACT GGATATTTGA ATAACTAGCT GTAAATGAGT TCTAGTTGTA 1260
|