| Tag | Content |
|---|
EnhancerAtlas ID | HS105-41255 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:56619550-56621070 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Myod1 | MA0499.1 | chr19:56620816-56620829 | AGAGACAGCTGCA | - | 6.36 | | REST | MA0138.2 | chr19:56619998-56620019 | CCTAGCACCCAGGGCAGCGCC | + | 6.08 | | Zfx | MA0146.2 | chr19:56621022-56621036 | GAGGCCGAGGCGGG | - | 6.01 |
|
| | Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
| SE_01218 | chr19:56618854-56620626 | Adrenal_Gland | | SE_23430 | chr19:56616631-56621015 | Colon_Crypt_1 | | SE_23834 | chr19:56616528-56620421 | Colon_Crypt_2 | | SE_23834 | chr19:56620531-56620944 | Colon_Crypt_2 | | SE_24810 | chr19:56616383-56620937 | Colon_Crypt_3 | | SE_30536 | chr19:56619664-56621055 | Fetal_Muscle | | SE_31642 | chr19:56616387-56621077 | Gastric | | SE_41593 | chr19:56616504-56621043 | LNCaP | | SE_42583 | chr19:56616608-56621126 | Lung | | SE_47517 | chr19:56619484-56620366 | Pancreas | | SE_47517 | chr19:56620505-56620895 | Pancreas | | SE_50656 | chr19:56619275-56621050 | Sigmoid_Colon | | SE_53594 | chr19:56617792-56621131 | Spleen | | SE_69016 | chr19:56619063-56620956 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I056104 | chr19 | 56616033 | 56626686 |
|
Enhancer Sequence | GCCCTGCCAG GAGGCGCCGC TCCCCGCTCT CTCCACCCAG CCCCTGCCCA GTGCTCCCTC 60
CACCTCGCCC CTGCCCAGCA CTCCCTGGCT CCCTCCACCC CGCCCCTGCC CAGAACTCCC 120
AGCTCCCACC ACCCAGCCCC TGCCCAGAGC TCCCCGGCTC CCTCCACCCC GCCCCTGCCC 180
AGCACTCCCT GGCTCCCTCC ACCCAACCCC TGCCCAGAGC TCCCCAGCTC CCTCCACCCT 240
GCCCCTGCCC AGAGCTCTCC TCCAGTCCTC CCAGCTGCCT CCTCTGGACT CCAGGTGAGG 300
GCCACCTCCT CAGGGTCCCC ACTTGCTCCA CCTGCCTGCC TTTCTCTTCC TAACGCCTGC 360
TACTCTGCCA CTCTCCGTGT CTCTGCTTAG CTGGCCTGTC CTCCCGGCAC CCTGTCATGT 420
CAGGGCCCGC TCTGACACCC ATGTGGTCCC TAGCACCCAG GGCAGCGCCA GGCACAGCTG 480
GGTGAGCACA CAAACAGGTA GGTCTGGACA AAGCACAGGC TTAAGACCAG ACACAGCAAA 540
TCCCAACACT CAGCCCCTCG CCGGACCTGT CTCAGGAAGA GGTGAGACCC ACGCGGAAGG 600
ACAGGCAGAC CTCCCCTCGG ACAGACCCCC GTGGGCTCTG GGTGCCTCGG ATGGAAGAGT 660
TCAGGCTAAA CTGCCATGAA CATGCTTGCA GCCCGACCAG GCTAGCTCTA CCTCTCCAGA 720
GGCTACCGAC AGGAAAGCCC AAATCTCAGG AAATGCTTCT TGCAGAGACA GCCTCCATCA 780
CAGTGAGGTT CCGAATGGGG AAACCGGGAG GAACTCAAGA GACCCACGCC GGGGAGGTGG 840
GTGGAGTCAC CCCTCCTCCA CGGGAGCAAG GGAGCCGGCC AAGGAATGAC GGCTGGCACC 900
CCTCCCACGC CCAACATCAA GAGTGAGAGT GATCTCAACG TTTTTCTTAT GTTCATTTTC 960
CTAATATTTT AATAACAGGT AATTACGTCT GTATTAAGGG AAAAAGCCTA AAGGGGTGTC 1020
TTGGACAGCG GCTGGGGCTA CGTATCGGAA CTGGTAGATG GCTGGGTGCT GGGGGCCAGC 1080
AGTGAAGGCG ACGGCACAGA ACAGGCCACC CCAGTGCAGC CCCAAAGGCA CGGGGGCAGC 1140
AGCAGATGCG AGAAGGGTGC TCTAGCCTCC CCTTTCTTCC TGCAAGCAGA TGAAACCCCA 1200
CGTGAAACAC GCCCTCCTCG TAGAGGAAGA GGACGTGCTC ATCACCAGCA CCGGGAGCTG 1260
AGGCTGAGAG ACAGCTGCAC ACACCAACCC TTATCTCCCT CAGCCTCCCC AAGGATTTTA 1320
GTTACTTTTT CACAGTTGCT ATTCTTGGGC ATAGAAGCCC TCAGGTCTAA CTGCTTCAGG 1380
AGGCCTTCAC TTTCTGAAGT CTCCCATGTA CCTGTAAAAA TAACATTTGT GGCCGTGCGC 1440
AGCGGCTCAC ACCTGTAATC CCAGCACACT GGGAGGCCGA GGCGGGTGGA TCACGAGATC 1500
GAGACCATCC TGGCTAACAC 1520
|
