EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-41223

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:55999980-56000370

Target genes

Number: 22
Name	Ensembl ID

RDH13	ENSG00000160439
EPS8L1	ENSG00000131037
PPP1R12C	ENSG00000125503
PPP6R1	ENSG00000105063
HSPBP1	ENSG00000133265
BRSK1	ENSG00000160469
SUV420H2	ENSG00000133247
COX6B2	ENSG00000160471
IL11	ENSG00000095752
TMEM190	ENSG00000160472
TMEM238	ENSG00000233493
RPL28	ENSG00000108107
UBE2S	ENSG00000108106
ISOC2	ENSG00000063241
ZNF628	ENSG00000197483
NAT14	ENSG00000090971
SSC5D	ENSG00000179954
SBK2	ENSG00000187550
ZNF580	ENSG00000213015
U2AF2	ENSG00000063244
EPN1	ENSG00000063245
AC010525.1	ENSG00000203305

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr19:56000352-56000370	CCCTCCGCCCTCCCTTCC	-	6.1
NR2C2	MA0504.1	chr19:56000024-56000039	CCACCTCTGACCCCT	-	6.23
RREB1	MA0073.1	chr19:56000267-56000287	TGTGTGTGTGTGTGTTGGGG	-	7.29

Enhancer Sequence

GGTGAGTGAT CCATTCTCCT TGGGGACTCG GGGGGCCTAG GCCCCCACCT CTGACCCCTT 60
AGCTTGTCCA GTTTAGGGAC TCAAACTTCC GGGACTGGTC GCTGGTGCTC CTGCATACCC 120
TGACATCCCT TCTGAGGATC CCTGCTCAAT CTGCCCAGCC TTCTGCCAGC CCAGAAGCCC 180
AAGGGACCTG CCCCCTGCCC GCCCCCCAGC CCTGACCCTG CGGGGGATCT CCCAGACATC 240
TGACCTTTAG CCAAGCCCAT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT 300
GTTGGGGTAT TCAAGATGAG GGGCCTGCGC TGGAGAAAGG GCCACCCCCG GCCTGCCCCT 360
CACACTGCCC CACCCTCCGC CCTCCCTTCC 390