EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-41215

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:55880310-55881670

Target genes

Number: 31
Name	Ensembl ID

CTC	ENSG00000243494
RDH13	ENSG00000160439
DNAAF3	ENSG00000167646
SYT5	ENSG00000129990
TMEM86B	ENSG00000180089
PPP6R1	ENSG00000105063
HSPBP1	ENSG00000133265
BRSK1	ENSG00000160469
SUV420H2	ENSG00000133247
COX6B2	ENSG00000160471
IL11	ENSG00000095752
TMEM190	ENSG00000160472
TMEM238	ENSG00000233493
RPL28	ENSG00000108107
UBE2S	ENSG00000108106
SHISA7	ENSG00000187902
ISOC2	ENSG00000063241
ZNF628	ENSG00000197483
NAT14	ENSG00000090971
SSC5D	ENSG00000179954
SBK2	ENSG00000187550
AC008735.15	ENSG00000231274
ZNF579	ENSG00000218891
FIZ1	ENSG00000179943
ZNF524	ENSG00000171443
ZNF865	ENSG00000261221
ZNF784	ENSG00000179922
ZNF580	ENSG00000213015
CCDC106	ENSG00000173581
U2AF2	ENSG00000063244
EPN1	ENSG00000063245

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr19:55880723-55880733	GGGGCGGGGC	-	6.02
NFYA	MA0060.3	chr19:55881462-55881473	TCTGATTGGCT	-	6.32
SP3	MA0746.2	chr19:55881051-55881064	CGCCCCGCCCACC	+	6.14

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1
Chromosome	Start	End

chr19

55880979

55881171

Enhancer Sequence

TGGGGGCAGG ATAAGGCAGA GAGCTCAGGC TGGACTCCGG GTCTGAGAGA GGAGGGCCTG 60
GGCCTGGACT CCCGGGTCTG AGGGAGGAGG AACTGGGGTC TGGACTCCTC CTGGGTCTGA 120
GGGAGGAGAG GCTGGGGGCC TGGACTCCTA GGTCTGAGGG AGGAAGGCCT GGGGTCTGGA 180
CTCCTGGGTC TCGGGGAGGA GGGTCTGGGG CCTGGACTCC CGGCCTTAGG GAGGATGGAG 240
CTGGAGGTCT TAAGTCCCAG GGTGGAACGC CCGCGGGCAG GTCGCAGGGC CAGGCGGGCT 300
TCCCTCTCCC TCCCTGGCTC TGGCTGCCCC GCCCGTCGGA GCAGACGCGG CCCGGGGCGG 360
GTAGACGGGC CGGGCGTCTC CCGTCCGCCC CCGGACGCCG GAATCTGGGC CCCGGGGCGG 420
GGCATGGTGG GGGAGGCACA GGCCAGAACC TGCCCCCTCC CCGGGCCGCG GGAGCCCGAG 480
CTGGCTGGGA GCAGGGGAAG GAGCCAGAAG CCAGGACGGA GCCCGGGAGA CACGGACCTC 540
TCCCACGGGA GACCCCTTAG ACGCCCTCCC AGGAGCCCCG CCGGGTGGGC GGCAGAAGCC 600
CGGGCCGCAG CGCACCTGGG CGGAGAGGGG CAGAGCCATG GGCCCGGCCG GGCCGCGGGA 660
GCGGGAGAGC TGGCGGCGGG GGGCGCGGGG GGCGCGGGGG GCGCGGGGGT CCGGAGCTCG 720
CTCCCCGCAG CCCACCCCGG CCGCCCCGCC CACCCGGCCA CCCGCCAGCC AATCAGCGCT 780
CCCCGGCCGC CCGCGCCTCG CACACCCCCA GCCCGCCCCC CGGGCCCGCC AGCCGTCGGT 840
CTGTCCGCGC CTCCGTCGGC CGCATCTGCC CGGCTCTCCC CGCTTTCCCC CCGCGCCCAG 900
TCTCTCTCCT CCCCCCGGCT GGGGTCGCTA CTCCCTGGCT TGCTCCGCTC TCCGCGGACC 960
CTGCCTCAGT TTCCCTCCGG AGCCTCTCTG CCGGAATCCC AGGGAGTCTC CCGGTCCCCG 1020
CGGGCTCCCT GGGGCCTGGG TCGATGGGGG TCACCTCCCT CCCGGCACCA GTCCCTGCGT 1080
CCCTGCCCCT GCTCGGTCTC CGCGTCTCGC TCCCTCTCGG GGCCCTGTCT GGCCCGTCCC 1140
TCCTGCGGCG CCTCTGATTG GCTGCCTCCA TCCGCTCCTG TCTGTGTCTC TCTCTGCCCA 1200
TCTCCTCCGC CGCCTCCTGT CTCCGAAGCT GCTCTCCTCC CCGGCTGCCT GTCTCCGGGT 1260
CCCTCTCTGT GCGACTCAGC GGGGTCTGCT CCCACCCCCG CCGTGGGTCC CTCTCCTCCC 1320
TGCCTCCCTG TCCCCTCCAC CCTCCCCATG AACCAACTTA 1360