EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-41200

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:55683880-55684460

Target genes

Number: 18
Name	Ensembl ID

SYT5	ENSG00000129990
PTPRH	ENSG00000080031
HSPBP1	ENSG00000133265
SUV420H2	ENSG00000133247
COX6B2	ENSG00000160471
IL11	ENSG00000095752
UBE2S	ENSG00000108106
SHISA7	ENSG00000187902
ISOC2	ENSG00000063241
NAT14	ENSG00000090971
SSC5D	ENSG00000179954
ZNF579	ENSG00000218891
FIZ1	ENSG00000179943
ZNF524	ENSG00000171443
ZNF865	ENSG00000261221
ZNF580	ENSG00000213015
U2AF2	ENSG00000063244
EPN1	ENSG00000063245

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SOX10	MA0442.2	chr19:55683990-55684001	TCCTTTGTTTT	-	6.32
Sox3	MA0514.1	chr19:55683991-55684001	CCTTTGTTTT	+	6.02
ZNF263	MA0528.1	chr19:55684091-55684112	GAAGGAAGAAAAAAAAGAGAG	+	6.1

Enhancer Sequence

AAAAAAGAAA AGAAAAAAGA AAGAGGTGAA GTTGAAATCA TTGGCTTTCC TTGCTGAACT 60
CCAACCTCTC TCGCAGGCTC TGGAGATTGT ATTCCCTGGC TCCGCGCCTC TCCTTTGTTT 120
TGATGGCAGT AAGTCGCTTG GGGGGTCAGG TCTGTGTTTG GATATTCTGG GGCCCCAGCA 180
CTCAACAGAA GACCTCAGGG AATATGGAAT GGAAGGAAGA AAAAAAAGAG AGGGAGGGAG 240
GGATGCAGAA ATGGGTATGA AAATCGATGT GAGTCATGGG TGAGCAAGCG AGTGGATAAA 300
TTCATGGACA AGCAAGGGAG TTCTCGCGGA CTCCTCACAG CCAGCGTGTG GCAGGAATTA 360
TTATTATCCC AACATTCTCC AGAGGAGGAA ACCCAGGCTC AGAGTGGTGA GTGAGGAATG 420
AACGGGTGAG AGTGTGAGGG AGTCCATGGG GTCAGGCCAG TCTCTCAGAG GCTTTCAGGA 480
CGAACAGCAC TCACACCGCC CTGCGAGCGC CCATTCCTGG AAACGAGGTT TCCTCTTGGG 540
TCCCAGCCCT TGCCCACCCC CATCAAGGAG CATGGGCCCA 580