EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-41172

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:55536930-55538210

Target genes

Number: 24
Name	Ensembl ID

GP6	ENSG00000088053
RDH13	ENSG00000160439
EPS8L1	ENSG00000131037
PPP1R12C	ENSG00000125503
TNNT1	ENSG00000105048
DNAAF3	ENSG00000167646
PTPRH	ENSG00000080031
TMEM86B	ENSG00000180089
PPP6R1	ENSG00000105063
HSPBP1	ENSG00000133265
BRSK1	ENSG00000160469
IL11	ENSG00000095752
TMEM190	ENSG00000160472
RPL28	ENSG00000108107
UBE2S	ENSG00000108106
SHISA7	ENSG00000187902
ISOC2	ENSG00000063241
ZNF628	ENSG00000197483
NAT14	ENSG00000090971
SSC5D	ENSG00000179954
ZNF579	ENSG00000218891
ZNF580	ENSG00000213015
U2AF2	ENSG00000063244
EPN1	ENSG00000063245

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr19:55537153-55537168	GAGGTCAAGAGTTCA	+	7.64
RARA	MA0729.1	chr19:55537153-55537171	GAGGTCAAGAGTTCAAGA	+	6.45
Zfx	MA0146.2	chr19:55538018-55538032	GAGGCCGAGGCGGG	-	6.01

Enhancer Sequence

AGGCGTGGTG GTGTGCACCT GTAATCCCAG CTGCTCGGGA GGCTGAGGCA GGAGAATCAC 60
TTGAACCTAG GAGGCAGAGG TTGCAGTGAT CTGAGATCGC ACCACTGCAC TCCAGCCTGG 120
GTGACGCAGT AAGACTCCAT CTGAAAAAAA AAGGCTTAGC CAGGCGTGGT GGCTCACACC 180
TGTAATCCCA GCACTTTGAG AGGCCGAGGC AGGCAGATCA CCTGAGGTCA AGAGTTCAAG 240
ACCAGCCTGG CCAACATGGT GAAACCCTGT CTCTACGAAA AATACAAAAA TTAGCTGGGC 300
ATGATGGCAG GTGCCTGTAA TCCCATCTAC TCAGGAGGCT GAGGCAGGAG AATCGCTTAA 360
ACCCAGGAGG TGGAGGTTGC AGTGAACTGA GATCACTCCA CTGCACTCCA GCCTGGGTGA 420
CAAAGTGAGA CTCCCCCCAA AAAAAAAAAA AAAAAAAAAA GCAGCAGCAT TTGTAAAGCA 480
CACCTGGCAC ATTCTGGGCT ATTAACAAGG AAATGCATGC AGCTCCCGTC CACCTTTTTC 540
AACCTCAGTT CTATTTCTTC TGGATTCCTG TGTCCTACCC CTCACTGTGA CCCTGGGGGC 600
AAAACAGATT TTTCTACCAA AAACTAAATG ATGTATTTTG TTTGATTTAA TATGACATTG 660
TTAAATGTAC TGATCAGTGG CGTTGGGTAT GTTCACATTG TGGTACAATA TGTTGACCTC 720
TAGAACTTAT TTTTCTTGCA AAACTGAAAT TCTGTGCCCA TTAAACACTA ATTCCTTCTC 780
TCTCCTCTTT CTGGCCCTTA ACAACCACCA TTGTACTTTG TGTTTCTACA GTGTTGACAT 840
TAGATACCTC CTTTGACTAG AATCATACAG TAGTTGTCCT TTTGTGACTG ACTTAGCATA 900
ATGTCCTCAA GGTATATCCA TGTTGTAGTA TGTGTCAGAA TTTCCTTCTT TTTTAAGGCT 960
GCATAATATT CCATTGCATG TATATAACCA CATTATGAGG TATGCTGCTC TTTTTTGAAA 1020
GAAACCCCCT TTAAGAATGG TAGTCAAGTC CGACGCGGTG GCTCACGCCT GTAATCCCAG 1080
CACTTTGGGA GGCCGAGGCG GGCAGATCAT GAGGTCAGTT CAAGACCAGC CTGACCAACA 1140
TAGTGAAACC CCGTCTCTAC TAAAAATACA AAAATTGGCC GGGCATGGTG GCAGGCACCT 1200
GTAATTCCAG CTACTCGAGA GGCTGAGGCA GCAGAATCGC TTGAACCCGG AAGGCGGAGG 1260
TTGCAGTGAG CTGAGATCGC 1280