EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-40723

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:47287400-47287770

Target genes

Number: 19
Name	Ensembl ID

PPP5C	ENSG00000011485
CCDC8	ENSG00000169515
PNMAL1	ENSG00000182013
AC011484.1	ENSG00000204850
PNMAL2	ENSG00000204851
AC011551.1	ENSG00000249210
AC011551.2	ENSG00000230510
CALM3	ENSG00000160014
PTGIR	ENSG00000160013
CTB	ENSG00000245598
DACT3	ENSG00000197380
PRKD2	ENSG00000105287
FKRP	ENSG00000181027
STRN4	ENSG00000090372
SLC1A5	ENSG00000105281
AP2S1	ENSG00000042753
ARHGAP35	ENSG00000160007
TMEM160	ENSG00000130748
SAE1	ENSG00000142230

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_19830	chr19:47286788-47292288	CD4p_CD25-_Il17p_PMAstim_Th17
SE_23552	chr19:47286840-47291960	Colon_Crypt_1
SE_39329	chr19:47286655-47291880	IMR90
SE_40036	chr19:47286598-47292621	K562
SE_51044	chr19:47286963-47292481	Sigmoid_Colon
SE_57604	chr19:47287652-47288229	VACO_503
SE_59465	chr19:47286733-47292626	Ly3
SE_69019	chr19:47286743-47291887	H9

Enhancer Sequence

ACTGTAGGTG GGGTTGGGAA GAGTCAGTGT CCATCGTTAC CAGGGCCTCC CAACCCCATG 60
CCAAGCTAAC AATGCTCAAA GCCTGCCCTT CCACATCCTT TCAATGTGAT CTCATTTCAT 120
CTGCTGGCAA CCCCATGGGG CAGGATGATC AATACCCCCA TTTTCCAGAG GTGGAAAACC 180
GAGGCTCAGA GAGGTAAACA CATTTACCCA GAGTCACACA GCTAGAATTA AAACTCACAG 240
GAGGCTCTGA GCCCGTATTC TCATTGACAT GCATTTTTCC AGGAACTAAC CAAAATCAGG 300
TAGCAAGGGC TCCCCCTGGC TGGCATCCCT CCCTGTCCAC CCCCATCCCC TCAGGACACC 360
CCTGAGGACT 370