EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-40722

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:47286710-47287350

Target genes

Number: 16
Name	Ensembl ID

PPP5C	ENSG00000011485
CCDC8	ENSG00000169515
PNMAL1	ENSG00000182013
AC011484.1	ENSG00000204850
PNMAL2	ENSG00000204851
AC011551.1	ENSG00000249210
CALM3	ENSG00000160014
PTGIR	ENSG00000160013
CTB	ENSG00000245598
DACT3	ENSG00000197380
PRKD2	ENSG00000105287
FKRP	ENSG00000181027
STRN4	ENSG00000090372
SLC1A5	ENSG00000105281
AP2S1	ENSG00000042753
ARHGAP35	ENSG00000160007

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1

MA0050.2

chr19:47286730-47286751

AAAAAAAAAAAGAAAGAAAGA

6.25

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_19830	chr19:47286788-47292288	CD4p_CD25-_Il17p_PMAstim_Th17
SE_23552	chr19:47286840-47291960	Colon_Crypt_1
SE_39329	chr19:47286655-47291880	IMR90
SE_40036	chr19:47286598-47292621	K562
SE_51044	chr19:47286963-47292481	Sigmoid_Colon
SE_59465	chr19:47286733-47292626	Ly3
SE_69019	chr19:47286743-47291887	H9

Enhancer Sequence

AAAATTCTGT CTCAAAAAAA AAAAAAAAAA AGAAAGAAAG AAAAGAAAAG ATACTCAGGG 60
CCAGGAGCAG TGCCTCACGC CTGTAATCCC AGCACTTTGC GAGGCGGCCA AGGTGGGCAG 120
ATCACTTGAG CCCGAGAGTG CAAGACCAGC CTGGGCAACA TGGCAAAACT CAGTCTCTAT 180
AAAAGATACA GAAATTAGCC AGGTGTGTTA TAGTCACAGC TACTGGGAAG GCTGAGGTGA 240
GAAGGATCAC TTGAGCCCAG GAGGTGGAGA CTGCAGTGAG CTGTGATCGT GCCACCGTAC 300
TCCAGCCTGA ATGATGGAGA GAGATCCTGT GTCAGAAAAA CAACAACAAA AACCTCTGGC 360
TGGCTGCCAG TTTGAGCAGG TTGAGGGTGG ATGGAAGGGG GCAGGGAGAG GGCAGCATGG 420
AATGGGGTTG GGGGGTGAGG GAGAAAGGAA GAGCCTGGGC ACCTGGGGTG GGAAAAGAGG 480
GGACAAAGTA GAGACCTATC CAGAAGGCAG AAAAGACAGA AATTGGGGAA GGACTGCAGA 540
GTGTCAATCA AATTCCACAG CAAAGACTAA GGCAGAAATA AAACCAAAAA ATTATAGCAA 600
TAGGCAAAGA GGTAGAGCCC CCGCTGCCTC CCACTGCTCT 640