EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-40702

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:47209720-47211400

Target genes

Number: 20
Name	Ensembl ID

PPP5C	ENSG00000011485
CCDC8	ENSG00000169515
AC011484.1	ENSG00000204850
PNMAL2	ENSG00000204851
AC011551.1	ENSG00000249210
AC011551.2	ENSG00000230510
CALM3	ENSG00000160014
PTGIR	ENSG00000160013
CTB	ENSG00000245598
DACT3	ENSG00000197380
PRKD2	ENSG00000105287
FKRP	ENSG00000181027
STRN4	ENSG00000090372
SLC1A5	ENSG00000105281
AP2S1	ENSG00000042753
ARHGAP35	ENSG00000160007
NPAS1	ENSG00000130751
TMEM160	ENSG00000130748
ZC3H4	ENSG00000130749
SAE1	ENSG00000142230

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr19:47211137-47211152	GAGGTCAGGAGTTCA	+	6.22
Sox6	MA0515.1	chr19:47210854-47210864	AAAACAATGG	-	6.02

Enhancer Sequence

AAATGGTCTT TGCACACAGG AACCATTTCC CAGTGTTGGC CTTGAATCAC TCATGTGCCT 60
TCCAGAATTT CAGAATCTTA TCTATAACTC TCAGAATGAG TCTCAGGATA GAGTTAAACT 120
CCTGTCGGAA TGTAGTCATT TGGGGTTCTC TTGCCACCAT AGGAACTGGG ACCATCATCT 180
GTGATGCTGC ACCAGTGAAG TCTGTGCTGA TAACCCATTA GGACTTGATG ACACCAGGGC 240
TGTATCATGA CAAAGACTGC ATATGCTGAG ACCTCAAGAG TTGGATATGG TGTGTGGACG 300
ATGGCAATAT TTATAAGAGC TTTTAATGCA CTGAATCAGT ATCTGCAGGC CTAGAGTCCT 360
TAAATAATAC AAGTATACTT TGGACTGCAT GATGATCTGG AACACAGGAT ATTGGAGAAA 420
CTGGATTTCT TTTTTTTTTT TTTTTTTGAG ACGGAGTCTC ACCCTGTCAC CCAGGCTGGA 480
GTGCAATGGT ATGATCTCGG CTCACTGCAA CCTCCACCCC CTCAGGTTCA AATGATTCTC 540
CTGCCTCAGC CTCCCGAGTA GCTGGGATTA TAGGTACCCG CCACCACACC CAGCTAATTT 600
TTCTAGTTTT AGTAGAGACA GGGTTTCACC ATGTTGGCCA GGCTGGTCTC TAACTCCTGA 660
CCTCATGATC CGCCCGCCTT GGCCTCCCAA AGTGCTGGGA TTACAGGTGT GAGCCACCGT 720
GCCTGGCCCA GAATCAGGAT TTCTGTACAA GCGTGGCACC CACGGAGCTA GAGATGCTGT 780
CTCAGACCTA ATACCCAATG GAACATCCAA GAATATGGCT CTAATTGCAG GGCACACCAT 840
ACAAAAATGG AGGCGCATGG GGCCCAGCGC AGTGGCTCAT GTCTGTAATC CCAGCACTTG 900
GGGAGGCTGA GGAGGGTGGA TTACTTGAAA CCAGCCTGGC CAACATGGTG AAACCCCGTC 960
TACTAAAAAT ACAAAAATTA GCCAGGAGTG GTGGTGCGCA CCTGTAATCC CAGCTATTTG 1020
GGAGGCTGAA GCAGGAGAAT TGCTTGAACC CAGGAGGTAG AGGTTGCAGT GAGCCAAGAC 1080
CACGCCACTG CACTCCATCC TGGGTGACGG AGCAAGACTC TGTCTCACAC ACACAAAACA 1140
ATGGAGCCAC AGGGTCTCAT CACAGAATGG ATGGTCCTCA CCTGTCATCT GTCCTCATAG 1200
CCAATGCAGG TACATGGCCT TCATCTGTAG GCAGAGCCCC GATTTCAACA TTCTCACTCA 1260
GAAGCATGAA TAACAGGGAC AGAGGACCTA TATAGATCTT GACACTTGGG CTGAACCTTG 1320
AGACATCTTG GCTTAAAGAA CTGTATGTTT TGGACAGGCG CGGTGGCTCA TGCCTGTAAT 1380
CCCAGCACTG TGGGAGGGCA AGGCGGGTGG ATCATTTGAG GTCAGGAGTT CAAGACCAGC 1440
CTGGCCAACG TGGTGAAACC CCGTCTCTAC TAGAAATACA AAAATTAGCC GGGCAGTAAT 1500
GGTGTGTGCC TGTAATCCCA GCTACTCGGT AGGCTGAGGC AGGAGAATCG CTTGAGCCTG 1560
GGAAGTGGAG GTTGTGGTGA GCTGAGATCG CGCCACTGCA CTCCAGCCTG GGTGACAGAC 1620
TGAGACGCTG TCTCCAAAAA AGAAAACCTG TATATTTTTA AACTATGATT TAAGGAGATA 1680