EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-40575

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:45766620-45767940

Target genes

Number: 35
Name	Ensembl ID

PVR	ENSG00000073008
BCAM	ENSG00000187244
PVRL2	ENSG00000130202
TOMM40	ENSG00000130204
APOE	ENSG00000130203
APOC1	ENSG00000130208
APOC1P1	ENSG00000214855
CLPTM1	ENSG00000104853
RELB	ENSG00000104856
CLASRP	ENSG00000104859
ZNF296	ENSG00000170684
GEMIN7	ENSG00000142252
PPP1R37	ENSG00000104866
TRAPPC6A	ENSG00000007255
BLOC1S3	ENSG00000189114
EXOC3L2	ENSG00000130201
MARK4	ENSG00000007047
KLC3	ENSG00000104892
ERCC2	ENSG00000104884
CD3EAP	ENSG00000117877
PPP1R13L	ENSG00000104881
FOSB	ENSG00000125740
ERCC1	ENSG00000012061
PPM1N	ENSG00000213889
RTN2	ENSG00000125744
VASP	ENSG00000125753
GPR4	ENSG00000177464
OPA3	ENSG00000125741
EML2	ENSG00000125746
AC006132.1	ENSG00000241226
GIPR	ENSG00000010310
SNRPD2	ENSG00000125743
QPCTL	ENSG00000011478
FBXO46	ENSG00000177051
SYMPK	ENSG00000125755

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs7255933

chr19

45766729

hg19

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr19:45767750-45767771	AAAAAAAAAACGAAAGTGGAA	-	6.94
RREB1	MA0073.1	chr19:45767840-45767860	GGGGTGGGGGTGTTATGGTT	-	6.14
Zfx	MA0146.2	chr19:45766759-45766773	GAGGCCGAGGCGGG	-	6.01
Zfx	MA0146.2	chr19:45767519-45767533	GAGGCCGAGGCGGG	-	6.01

Enhancer Sequence

CATCGGTGAG GAGGGAATGG GAGCAGGGGC AGGCCACCAA CTGGAACACT TGCAAAGGAG 60
TTGGGGGTGG TGGCAGTGGT TAGAATAGTT GGAGACCCAC CAGGCGCAGT GGCTCACTCC 120
TGTAATCCCA GCACTTAGGG AGGCCGAGGC GGGTGGATCA CTTGAGGTCA GGAGTTCGAC 180
ACCAGTCTGA CCAACATGGT GAAACTCTGT CTCTACTGAA AATACAAAAA TTAGCAGGGC 240
ATGGTGGCGG GCGCCTGTAA TCCCAGCTAC TCGGGAGGCT GAGGCAGGAG AATTGCTTGA 300
GCCCAGGAGC CAGAGGTTGC AGTGAGCTGA GATCGCACCA CTGCACCCCA GCCTGGGCAA 360
TAAAGCGAGA CTTCATCTCA AAAAAAAAAA AAAAAGAAAA AGTTAGAGAC CTGGTTTCTC 420
ATAGTTGCAT CACTGCTGTG TGACCTTGGG CAAGTCACTT AACCTCTTTG AGCCTCTATT 480
TTCTCTTCTG GAGTAGGGGT GATAAGAGGG CCTATTACCA GGTCATTGTG AGGATTGACA 540
AAGATGATGC ATCCAAAATG CTTAGTTTGG GCTGAGCTAT GGGACTTGGT CCAGTTATTT 600
CCACCAGCAT CAACATCCTC ACTGTCATTA TCATTGGGCA GAGGCGGGAG TGAGGGGTCT 660
TTAGTGAGAG AAGCGGAGTT TAGCTCCGCC TGGATGTGGC TGCAGCATTT GTTCATTCAT 720
TCATTCATTT ACTCAGTAAT TATTGATTGA GTGGCCGCTA TGTGCCAGAC CCTGGGGACA 780
CAACAGGGAA GACAACAAGA CACAAATCTC TGGCCTCATG GAGCTGACAT TCTTGTGAGA 840
GAGAAAGTGG AAAGGGTGGC TGGGCGCGGT GGCTCACGTC TGTAATCCCA GCACTTTGGG 900
AGGCCGAGGC GGGTGGATGA CCTGAGGTTG GGAGTTGGAG ATCAGCATGA CCAACATGGA 960
GAAACCCCGT ATCTATTAAA AATACAAAAT TAGCCGGATA TGGTGGCGCA TGCTTGTAAT 1020
CCCAGCTACT CGGGAGGCTG AGGCAGGAGA ATCGCTTGAA CCTGGGAGGG TGAGCAGAGA 1080
TCGCGCCATT GCACTCCAGC CTGGGCAACA AGAGCAAAAC TCCATCTCAA AAAAAAAAAA 1140
CGAAAGTGGA AAGGGTGGTA GAGGGGGCTG AGGAGTTTGG AAAATCTTGC TGTCAGTAGG 1200
GAGCCATTGA GTGTTGAGTT GGGGTGGGGG TGTTATGGTT GGCACATTTG CATAGTTACT 1260
GAGGACAGGT TAGGAGGGGC CCTTTCTCCC TAATGCCCTA CACTGTTCCC AACCATTATA 1320