EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-40567

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr19:45657030-45658150

Target genes

Number: 25
Name	Ensembl ID

PVR	ENSG00000073008
BCL3	ENSG00000069399
BCAM	ENSG00000187244
PVRL2	ENSG00000130202
TOMM40	ENSG00000130204
APOE	ENSG00000130203
APOC1	ENSG00000130208
APOC1P1	ENSG00000214855
CLPTM1	ENSG00000104853
RELB	ENSG00000104856
CLASRP	ENSG00000104859
ZNF296	ENSG00000170684
GEMIN7	ENSG00000142252
PPP1R37	ENSG00000104866
NKPD1	ENSG00000179846
TRAPPC6A	ENSG00000007255
BLOC1S3	ENSG00000189114
ERCC2	ENSG00000104884
FOSB	ENSG00000125740
ERCC1	ENSG00000012061
PPM1N	ENSG00000213889
RTN2	ENSG00000125744
VASP	ENSG00000125753
AC006132.1	ENSG00000241226
GIPR	ENSG00000010310

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs10421247

chr19

45657486

hg19

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr19:45658066-45658081	GAGGTCAGGAGTTCA	+	6.22
SP1	MA0079.4	chr19:45657079-45657094	GGTGGGCGGGGCCTA	-	6.85
SP2	MA0516.2	chr19:45657078-45657095	GGGTGGGCGGGGCCTAG	-	6.85
SP3	MA0746.2	chr19:45657079-45657092	GGTGGGCGGGGCC	-	6.14
SP4	MA0685.1	chr19:45657077-45657094	GGGGTGGGCGGGGCCTA	-	6.7

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I045151

chr19

45654728

45658470

Enhancer Sequence

GCGCTGCGGG AAGGGAGCCC GGGAGCCGCG TGAGCCGCAG ACCCGCCGGG GTGGGCGGGG 60
CCTAGTACGG GCAGGGCGGA GCGCTCCTGG AGAGGCGAGG GGCGCCCAGC AGAGGCGAGG 120
GGCTGGAAGC GAGCCGCGGC CGCTCCTTAA AGAGCTGGAA GCCGGTGCAG AAGCGGGGGC 180
GTGGAGAGGC CTGGAGCCGG GCTTGGACCG GAAGCGGTCT GAAGGCCAGG CTGTGGGGTC 240
GGGATGGGCA GAGGTAGAGC CGGCAGAGGA GAGATGGGAG GAGGCAAAAA GAGATACGAG 300
GAAGAGCCAG GGATGGGCAA GAGGCTGGAG GCGGAGCGAG GGTGTGGAGG GCACCGGGAA 360
GGTTCTGAGA GTGGGGCAGG GGACAAGTGG TCGGTGTAAG GGATGAATGA ATGAGATGCT 420
GAGGAGGAGC TATGCTAGGC AGCAGGATAC ACCCTCGGTC TTATCTTGTT GACTTAACTG 480
CTCCTCCTGC AGGAAGCCCT CCCTGATCCC CAGGCTGGGT CGGGGGCCCT CAGCCATTCC 540
TACTCTGGGT CATCACTGTC TGAGGACAAG TCTCTCTCCC CTGCTGGACT GTGAGCCGGA 600
AGGGCAGGGT CCTGCTTGTC TTGGTCACCG TGTCCCCTGG GCACCAGAAG GTGCTTAGGG 660
AATGCCTGAA CAATAGATCA TGAGAAATCT GAGGTCACAG AGTGAATGAG CGGGAGTGTC 720
TACAGCACCC AGCAGGAGGA GTAGGGACTC TCTGTTCTTT ATATCCTCTT CTCCTCCCGG 780
GACCCTGTGA CAACACAGGA CAGGACAGTG AGTGCTCAAT GGACAGTCAG TACAGGAAGG 840
AAAGGCTATT GGGCCTGCAC CAGGGCTGGG CACACGTAGG AGGAACGTCA GTCCCAGCCC 900
CTCTGGCCCC ACGTGGGGCT GAGGTCTGAG CTCCAGCAGG GCTTGATCCA GATCAAAGCT 960
GCTGGGGAGG CCAGTCGCGG TGAGTCACGC CTGTAATCTC AGCACTTTTT GGGAGGCCGA 1020
GGTGGGCGGA TCACATGAGG TCAGGAGTTC AAGACCAGCC TGGCCAACAC GGTGAAACCC 1080
CATCGCTACT AAAAATACAA AAATTAGCCG GGCTTGGTGG 1120