| Tag | Content |
|---|
EnhancerAtlas ID | HS105-40455 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:44278770-44279440 |
Target genes | | Number: 18 | Name | Ensembl ID |
|
SNPs | | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RARA(var.2) | MA0730.1 | chr19:44278808-44278825 | AGGTCAGGCGCAGGTCA | + | 6.34 | | ZNF263 | MA0528.1 | chr19:44278946-44278967 | CTTTCCACTTTTTCCTCCTTC | - | 6.88 | | ZNF263 | MA0528.1 | chr19:44278955-44278976 | TTTTCCTCCTTCCCCACCACC | - | 6 |
|
| | Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
| SE_13735 | chr19:44278824-44286216 | CD34_Primary_RO01536 | | SE_14657 | chr19:44276982-44289957 | CD4_Memory_Primary_7pool | | SE_18680 | chr19:44279319-44287337 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_20985 | chr19:44277015-44280376 | CD8_Memory_7pool | | SE_23897 | chr19:44278849-44279190 | Colon_Crypt_2 | | SE_31804 | chr19:44277940-44279442 | Gastric | | SE_34298 | chr19:44278044-44278885 | HCT-116 | | SE_39921 | chr19:44275848-44280151 | K562 | | SE_59025 | chr19:44248893-44290143 | Ly3 | | SE_60730 | chr19:44257018-44289948 | DHL6 | | SE_62525 | chr19:44242576-44303622 | Tonsil |
|
Enhancer Sequence | GCTGCCGGTA GGGGGCCAAG AAGGGAGGGG TCAGGAGCAG GTCAGGCGCA GGTCAGGCGG 60
CGGCCCGCGC CTGCCTGCGC CCTGAGATAA GTGGGGTGTG CCGCCTGGCC AGGAGGGAGG 120
GAGTGCAGGG CGGGAGAGGG ATAGGGAGGG AGCGGGACAG GACTTGAGGA AGACATCTTT 180
CCACTTTTTC CTCCTTCCCC ACCACCCACC CCACTAGTTT CAGCCCACTT CCAGCCTTTG 240
AACACTGACT GAGCGCCGAC TGTGTGCCTG ACATTGTTCT ATGTGCTAAG GATACACAGT 300
GAACCCAACA GACCCCCCTG CCTCCCTAGA GCTTGCATTC CACATGCCTG GAGCTCGCTC 360
CTACTCCCCT TTCGGTTGAC ACGCGTAATA ACTGTAATAA TAATATCAGC AATAACAAAG 420
CCATGGGCCG GGCGCGATGG CTTACGCCTG TAATCCCAGC ACTTTGGGAG GCTGCGGTGG 480
GTGGATCACT TGAGGTCAAG AGTTTGAGAC AAGCCTGGCC AACATGGTGA AACTCCATCT 540
CTACTGAAAA ATACAAAAAT AAGCCGGGCA TGGTGGCGCA CACCTATAGT CCCAGCTTCT 600
GGGGAGTCTG AGGTAGGAGA ATCACTTGAA CCCAGGAGGC AGAGGTTGCA GTGAGCTGAG 660
GTCATGCCAC 670
|
