Tag | Content |
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EnhancerAtlas ID | HS105-40453 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:44268560-44270110 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RREB1 | MA0073.1 | chr19:44269851-44269871 | TGGTTTGGGGAGGTTTGGGG | - | 6.99 | RREB1 | MA0073.1 | chr19:44269841-44269861 | GGTATGTGGGTGGTTTGGGG | - | 8.75 |
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| Number of super-enhancer constituents: 27 | ID | Coordinate | Tissue/cell |
SE_02767 | chr19:44268896-44270200 | Astrocytes | SE_09619 | chr19:44267161-44274237 | CD14 | SE_10575 | chr19:44268972-44272145 | CD19_Primary | SE_11483 | chr19:44267220-44273841 | CD20 | SE_13735 | chr19:44268644-44271503 | CD34_Primary_RO01536 | SE_14657 | chr19:44268615-44271764 | CD4_Memory_Primary_7pool | SE_18182 | chr19:44268629-44272248 | CD4p_CD25-_CD45ROp_Memory | SE_18680 | chr19:44268558-44272624 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19217 | chr19:44268630-44272276 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20985 | chr19:44268851-44271784 | CD8_Memory_7pool | SE_23510 | chr19:44269009-44269976 | Colon_Crypt_1 | SE_27247 | chr19:44268619-44271203 | Esophagus | SE_31804 | chr19:44268953-44269991 | Gastric | SE_32542 | chr19:44266723-44271779 | GM12878 | SE_33868 | chr19:44268905-44271368 | HCC1954 | SE_34298 | chr19:44256799-44272203 | HCT-116 | SE_34813 | chr19:44268615-44271135 | HeLa | SE_37675 | chr19:44268467-44270470 | HSMMtube | SE_39921 | chr19:44268698-44269880 | K562 | SE_50403 | chr19:44268818-44272859 | Sigmoid_Colon | SE_53073 | chr19:44268934-44271511 | Small_Intestine | SE_53761 | chr19:44268902-44273559 | Spleen | SE_56117 | chr19:44266358-44271787 | u87 | SE_59025 | chr19:44248893-44290143 | Ly3 | SE_60730 | chr19:44257018-44289948 | DHL6 | SE_62525 | chr19:44242576-44303622 | Tonsil | SE_64692 | chr19:44268872-44270949 | NHEK |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr19 | 44269192 | 44269953 | chr19 | 44268660 | 44268747 | chr19 | 44269026 | 44270045 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I043762 | chr19 | 44266826 | 44273433 |
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Enhancer Sequence | CTACTACTAC TTGAGACAGG GTCTCACTTT GTCACCCAGG CTGGAGTGCA GTGGCACGAC 60 CACAGCTCAC TGCAGCCTCG ACTTCCCAGC CTCTTCAAGT GTTCCTCCCA CCTTACCCTC 120 CCAAGTAGCT GGGACCACAG GTGTGTGCCC CCACACCTGG CTAATTTGTT GTCGTTGTCG 180 TTGTTGTTGT TGTTTGAGAT GGAGTCTTGC TCTGTCACCC AGGCTGGAGT GCAGTGGCAC 240 GATCTCGGCT CACGGCAAAC TCCGCCTCCT GGGTTCAAGT GATCTCCTGC CTCAGACTCC 300 CGAGTAGCTG GGATTACAGG CACACACCAC CACGCCTGGC TAATTTTTGT ATTTTCAGTA 360 TAGACAGGGT TTCACCATTT TGGCCAGGCT GGTCTCGAAC TCCTGGCCTC AGGTGATCTG 420 CCTGCCTCGG CCTCCCAAAG TGCTGGAATT ACAGGCGTGA GCCACCATGC CTGGCCAGAC 480 CCAATATTAT TATCGTGATA GGGATAGGTT TATGAGGCTA TAGGAGTATC AGACAGGGCC 540 TCCTGGAGGA GGGGACATAT TAGCCGAGGC CTACAGGAGG CGTAGGAAGG AGTGTTTGCC 600 AGCTAAAAGG GAGTGGAGGC AAGGAAAGAG AGGTCCCAGA AGAATGAGTT TGGCAGGGGC 660 TTTGGCAACA CTGCCAGGAG AGCTTCTTGC AGGGGAAGGG TGTCAGCAAT ATCTGGAGGT 720 CTCATCCAGT TCCTTTCTTG AGTCCCCGCC TTTACTCCCC AGGTGGGCTG GCCTCCAGAG 780 GAAGGGCAGT TCGTGGCAGT GGGTGGCGGA GGCTCCAATT TAGCTCTCAG GGATGAAGGG 840 GCGAGGCTGG CTGTGGACTT TAAGGGAAAT CCAAAGATAG CTCAACAGAA AAGGATGACT 900 CGCAGCCTGA TCTTCCCCTC AAGAGGAGGG AAGCAAGAAT GAATCAGCCT CTCAAGCTGG 960 AATGAAGTTG CGGCGGGAAG TCAGTCCTCG GTTTGTGGCC CAAGGCCACT CTGCCTCTGA 1020 CTCACCTTGC AGTGGGGCGG GATGGGTGTG AATCTGGGCT CTCCAGCCCG TATTCCTAGC 1080 TTCCGGCTGG GGGCCTGAGG GGAGGCCTGG CTCCTCTTGA AACCTCGGTT TCTACATCTG 1140 TGCAGTGGGG TAACGAGGGT CAGGAGAGTG GTTATGGTGA CTTATAAACA GAGCTGGGCA 1200 CACAGTAGGG CCTCTGGAAG TGCCAGCCCC CCTCCTTTGC CCCCTTCCCT TTCACATCCT 1260 CTCTTGAGCG GATGTGAAAC GGGTATGTGG GTGGTTTGGG GAGGTTTGGG GCCTCTGTTA 1320 GTCTCTTGAT GAGTGAGTTG TCATCTAGAT TCTGGTAAGG CATGAATAGA GGGAGAAAAG 1380 CAACAAAAAA TCAGAAAAAG GGCAGCCACG CATTGTGTGT GAAAATCAAA AACAATAATA 1440 AAAATGATTC TTGGCCAGGG ACAGTGGCTC ACGCTTGTAA TCCCAGCACT TTGGGAGGCT 1500 GAGGCGGGCA GATTGCTTGA GCCCAGGAGT TCAAGACCAG CATCTGCAAC 1550
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