Tag | Content |
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EnhancerAtlas ID | HS105-40357 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr19:42788920-42790920 |
Target genes | Number: 15 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
KLF4 | MA0039.3 | chr19:42790154-42790165 | CCACACCCTCC | + | 6.32 | ZNF263 | MA0528.1 | chr19:42790345-42790366 | GGGGGAGGAAGGCAAGGAGCA | + | 6.09 |
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| Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
SE_01284 | chr19:42781638-42791464 | Adrenal_Gland | SE_03455 | chr19:42788745-42790206 | Brain_Angular_Gyrus | SE_04953 | chr19:42788344-42791653 | Brain_Cingulate_Gyrus | SE_07605 | chr19:42781558-42791069 | Brain_Hippocampus_Middle_150 | SE_13217 | chr19:42788922-42790847 | CD34_Primary_RO01480 | SE_24896 | chr19:42786186-42789139 | Colon_Crypt_3 | SE_27266 | chr19:42781558-42791468 | Esophagus | SE_32177 | chr19:42781573-42791946 | Gastric | SE_33522 | chr19:42779963-42790690 | H2171 | SE_41536 | chr19:42781527-42790773 | Left_Ventricle | SE_53994 | chr19:42781549-42791397 | Spleen | SE_56027 | chr19:42783135-42789531 | u87 | SE_63229 | chr19:42772010-42789457 | GLC16 | SE_68080 | chr19:42745789-42791545 | TC32 | SE_68081 | chr19:42745789-42791545 | TC32 | SE_68082 | chr19:42745789-42791545 | TC32 | SE_68083 | chr19:42745789-42791545 | TC32 | SE_68084 | chr19:42745789-42791545 | TC32 | SE_68085 | chr19:42745789-42791545 | TC32 | SE_68086 | chr19:42745789-42791545 | TC32 | SE_68445 | chr19:42745935-42790637 | TC71 | SE_68446 | chr19:42745935-42790637 | TC71 | SE_68447 | chr19:42745935-42790637 | TC71 | SE_68448 | chr19:42745935-42790637 | TC71 | SE_68449 | chr19:42745935-42790637 | TC71 | SE_68450 | chr19:42745935-42790637 | TC71 | SE_68451 | chr19:42745935-42790637 | TC71 | SE_69053 | chr19:42788186-42790817 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr19 | 42790000 | 42790601 | chr19 | 42789863 | 42790090 | chr19 | 42789363 | 42790000 | chr19 | 42789032 | 42789266 |
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Enhancer Sequence | TCGGTCAGTA GCGCCTGGGC CCTGGGACTG CAGGGGTCAA GGTGTCGGGG TGCTAAGTGC 60 GGAGTAACGG TGGTGGGGGT ATAGTAGGGG AGAGAACAGT AGAGGCAGAG TAAAGGGATG 120 ACGGGGAAAG TTACGGAGCT CGGCCGGGCC GAGTGGTTAG TGATGGCAGG TGGGAGTGTA 180 GCGGAGTGGG GCGTATCTGG GGACAGCTGT GATGTTAAAG TGATGGGATG GCACAGGTCC 240 GCTGTAATAG AAAGGTGAGG GGTGCAGAGT AACTGGCTCT GGAGCATGGG GTAGAATAGG 300 AACAGCACGA GACCTGCTGG TCCTAGGGGA GGAGGCTTGG ATTGGGTAGT GGGGCTAAGG 360 ACAGGGCTCA GGAAGCGAGT GAGGCACTGT TAGCTGAGAT CAGAGTGACA GGCTGCAGTG 420 TGTGGTGTAG TTTGCAGAGA GCGCGACACC TAAGAACCTG GAGGGTTGTG CACTGGGGAG 480 GGGTTCAGGA GGGAGCAGGA CCAAAGGACT GCCCTCCATT GTCTGCTGGG TCCCTTTTCC 540 CCACCCCCCA GAAAAGAGGA GGCCTTGATG GGAAAGATCT TTGCAAAGAG AGGCACAGGT 600 CTAAGTCCCT GGAGGCTTTT ATATGGGGTT GGAGGGCCCA GCGGGTTTTC AGGGGTAAGG 660 GACAGGGTCA TCGTAGTCTT GAGTGCTCTT CAGTGCTGTC TTCGTGATCC CAGTCCCTTG 720 TTTCCTGAGG TCTACTTTTT CCTTTGTCAG CCCCTCTCAG AATCAGGTCT CGAGGCCAGT 780 GCCTCGCACA GAGCTCCCCC CTGTCCAGGC TTCTGAAGGC ATGGGGAGGT CACCTCAGGT 840 CAGGTTGATC CGGATCAAGG GAAGGCCTGG AATGATGGAG AGCAGGGCTA GGGCGGTTCC 900 CTCCTCCCTT CTTCATCTTC CCCGAGCAGG GGCCTCTCTC CTCTGCTGGT TCCACTTCCC 960 CCAGGGAGCC AGGCAGTGTG AGGGGAAGCC CACTGGTATC CTAGGCCCGC CCCAAAAGTC 1020 CAGCCAGGGG TAGGTCCCAG CCTAGGGCTT GCTCTTCCAC CACCCACCTC TTGGGGCTGA 1080 AGGTTGGACC CCTGGGACCA GCCTCTTGGT GAGGAAGCAT CTTCCTGTGC ATATCCTCAA 1140 GGAAACACCT GGCACTTGTG CCCTCTCTGG GTAGAGACTT GTTACAATTC TCTCTTCTGG 1200 CCCATTGTCC GTGGTTTTTC TTCCAAGGAG TTTACCACAC CCTCCCCTGT TTTGGGCAAG 1260 GGGGCTGGAC CCTGGACTAC AGATAAGCCG AGGGGCTGAT GGGGAAGGGA GGCTGGGAGG 1320 CCGATTTCTG GATGGTGCAT TGTCTTTGTG GGGGCAAAGG AGAGAGCTGC TGGAGCCACC 1380 TGTGCCCAGC CAGGAAGGGC AGGTCTGGCA CTCTGTGTTT GTGGTGGGGG AGGAAGGCAA 1440 GGAGCAGGAC CTCTCCCACA CCACAGTTGT AAGAGACCCC ACAGCCTGTG CATAGTGAAC 1500 GGAGAGTTGG AGGGGAGGGG ACGTGGGGCC GTATGCCTCA GGAAAGGGAA AGAGAGCATG 1560 AGGCCAAGGT GAGACGCTGT GTTGGGCGGC GACTGGGCTG CTGGGAATGT GGCATGACGG 1620 GGGTGGGGGT CCCAGCCCGT AGAGGTCTGG GGCCTTGGGA GTGTGGGATG GCAGCCAAGC 1680 ATGACCTGGT TTGTGGCAGG AGCAAATCGT TCCTCTGGCC TGGTCCCTGG TGGCAGGGCT 1740 GGTGGAGATT GGTGGGGGGA GGAGTGGGGC GTGAGTACTA TTTCCCTTCC CTGCTTCTGT 1800 TTTCTTTTTT ATAAATCTAG AAACCTTTCA GGGAGGAGTT TTTCCTGAGT GACGTTGCAT 1860 GGACGAGTCC AAGAGGCTCT GGTGTTGGGG GTGGGGGGTA GACAAAAGGG GTGGGGCTAC 1920 CTCATCTAGG GTGGGGAAGA GCTTGAGTTG GGGTTGGGGC CAGGCTCTCC TGCTGCACAG 1980 CTCACCTGGC TCCTTTCCAC 2000
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